H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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H-Invitational ID: HIT000422943 Accession number: AK290146 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Cold shock domain-containing protein E1 isoform 1.

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Transcript original information Accession number AK290146.1 CAGE tag ID NA EST ID NA Clone Number BRTHA2031892 Experimental resources   NBRC ; HGPD ; Antibody (CSDE1) ; Catalog (CSDE1); Sequence data provider NA Annotation project NA Length of cDNA 2667[bp] (No. of exon:19)[A:801 T:700 G:650 C:516] Devision HUM Molecular type mRNA Library origin Cell type NA Tissue type thalamus Develpmental stage NA

Sequence quality information CDS feature Complete CDS Kozak sequence NA PolyA NA Vector/adapter sequence NA Frame shift NA Remaining intron NA Splice site acceptor (NAGNAG) CAGGAG;  TAGGAG;  Transcript quality feature NA Notes NA

TACGTACCGGGCCGTGCTGCTTATGGCGGCGCTGGAGAGGGGGCGCTGAG CTGTTGGGATGAGCTTTGATCCAAACCTTCTCCACAACAATGGACATAAT GGGTACCCTAATGGTACTTCAGCAGCACTGCGTGAAACTGGGGTTATTGA AAAACTGTTAACCTCTTACGGATTTATTCAGTGTTCAGAACGTCAAGCTA GACTTTTCTTCCACTGTTCACAGTATAATGGCAACCTGCAAGACTTAAAA GTAGGAGATGATGTTGAATTTGAAGTATCATCGGACCGACGGACTGGGAA ACCCATTGCTGTTAAACTGGTGAAGATAAAACAAGAAATCCTCCCGGAAG AACGAATGAATGGACAAGTTGTGTGCGCTGTTCCTCACAACTTAGAGAGT AAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGA ACGTAATGGGGAAGTGTTTTATCTGACTTACACCCCTGAAGATGTCGAAG GGAACGTTCAGCTGGAAACTGGAGATAAAATAAACTTTGTAATTGATAAC AATAAACATACTGGTGCTGTAAGTGCTCGCAACATTATGCTGTTGAAAAA GAAACAAGCCCGCTGTCAGGGAGTAGTTTGTGCCATGAAGGAGGCATTTG GCTTTATTGAAAGAGGTGATGTTGTAAAAGAGATATTCTTTCACTATAGT GAATTTAAGGGTGACTTAGAAACCTTACAGCCTGGCGATGATGTGGAATT CACAATCAAGGACAGAAATGGTAAAGAAGTTGCAACAGATGTCAGACTAT TGCCTCAAGGAACAGTCATTTTTGAAGATATCAGCATTGAACATTTTGAA GGAACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAAAACCAGAATGA CCCATTGCCAGGACGCATCAAAGTTGACTTTGTGATCCCTAAAGAACTTC CCTTTGGAGACAAAGATACGAAATCCAAGGTGACCCTGCTGGAAGGTGAC CATGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTAGAGCGAGC AACCAATATAGAAGTTCTGTCAAATACATTTCAGTTCACTAATGAAGCCC GAGAAATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAG TGTGTGGATCGTGATGTTCGTATGTTCTTCCACTTCAGTGAAATTCTGGA TGGGAACCAGCTCCATATTGCAGATGAAGTAGAGTTTACTGTGGTTCCTG ATATGCTCTCTGCTCAAAGAAATCATGCTATTAGGATTAAAAAACTTCCC AAGGGCACGGTTTCATTTCATTCCCATTCAGATCACCGTTTTCTGGGCAC GGTAGAAAAAGAAGCCACTTTTTCCAATCCTAAAACCACTAGCCCAAATA AAGGCAAAGAGAAGGAGGCTGAGGATGGCATTATTGCTTATGATGACTGT GGGGTGAAACTGACTATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTAC TTCTCCTCAAATAGGAGATAAGGTTGAATTTAGTATTAGTGACAAACAGA GGCCTGGACAGCAGGTTGCAACTTGTGTGCGACTTTTAGGTCGTAATTCT AACTCCAAGAGGCTCTTGGGTTATGTGGCAACTCTGAAGGATAATTTTGG ATTTATTGAAACAGCCAATCATGATAAGGAAATCTTTTTCCATTACAGTG AGTTCTCTGGTGATGTTGATAGCCTGGAACTGGGGGACATGGTCGAGTAT AGCTTGTCCAAAGGCAAAGGCAACAAAGTCAGTGCAGAAAAAGTGAACAA AACACACTCAGTGAATGGCATTACTGAGGAAGCTGATCCCACCATTTACT CTGGCAAAGTAATTCGCCCCCTGAGGAGTGTTGATCCAACACAGACTGAG TACCAAGGAATGATTGAGATTGTGGAGGAGGGCGATATGAAAGGTGAGGT CTATCCATTTGGCATCGTTGGGATGGCCAACAAAGGGGATTGCCTGCAGA AAGGGGAGAGCGTCAAGTTCCAATTGTGTGTCCTGGGCCAAAATGCACAA ACTATGGCTTACAACATCACACCCCTGCGCAGGGCCACAGTGGAATGTGT GAAAGATCAGTTTGGCTTCATTAACTATGAAGTAGGAGATAGCAAGAAGC TCTTTTTCCATGTGAAAGAAGTTCAGGATGGCATTGAGCTACAGGCAGGA GATGAGGTGGAGTTCTCAGTGATTCTTAATCAGCGCACTGGCAAGTGCAG CGCCTGTAATGTTTGGCGAGTCTGTGAGGGCCCCAAGGCTGTTGCAGCTC CTCGACCTGATCGGTTGGTCAATCGCTTGAAGAATATCACTCTGGATGAT GCCAGTGCTCCTCGCCTAATGGTTCTTCGTCAGCCAAGGGGACCAGATAA CTCAATGGGGTTTGGTGCAGAAAGAAAGATCCGTCAAGCTGGTGTCATTG ACTAACCACATCCACAAAGCACACCATTAATCCACTATGATCAAGTTGGG GGGAATCTGGTGAAGGGTTCTGAATATCTCCCTCTTCATCCCTCCCGAAA TCTGGAATACTTATTCTATTGAGCTATTACACCAGTTTTAACACCTTCCT CGTGTTATGTTTAAAAAAATAAATAAATTTAAGAAAACCATTTTAAATAA TGCACAGTTGCAGCCTG