H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000422943 Accession number: AK290146 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Cold shock domain-containing protein E1; N-ras upstream gene protein; Protein UNR;
 
 

Motif information
ORF

length(798),orf(59:2455)
MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLF
FHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERM
NGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNV
QLETGDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFI
ERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKEVATDVRLLPQ
GTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREM
GVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDML
SAQRNHAIRIKKLPKGTVSFHSHSDHRFLGTVEKEATFSNPKTTSPNKGK
EKEAEDGIIAYDDCGVKLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPG
QQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFS
GDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK
VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGE
SVKFQLCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFF
HVKEVQDGIELQAGDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRP
DRLVNRLKNITLDDASAPRLMVLRQPRGPDNSMGFGAERKIRQAGVID*
a.a.
length
InterPro Name
length(77), motif(17:93) 77 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(69), motif(25:93) 69 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(64), motif(27:90) 64 IPR011129 Cold shock protein [Domain]
length(63), motif(27:89) 63 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(20), motif(37:56) 20 IPR019844 Cold-shock conserved site [Conserved_site]
length(73), motif(181:253) 73 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(69), motif(185:253) 69 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(62), motif(186:247) 62 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(62), motif(187:248) 62 IPR011129 Cold shock protein [Domain]
length(20), motif(197:216) 20 IPR019844 Cold-shock conserved site [Conserved_site]
length(82), motif(336:417) 82 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(71), motif(348:418) 71 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(64), motif(350:413) 64 IPR011129 Cold shock protein [Domain]
length(61), motif(351:411) 61 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(20), motif(360:379) 20 IPR019844 Cold-shock conserved site [Conserved_site]
length(58), motif(457:514) 58 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(79), motif(504:582) 79 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(65), motif(518:582) 65 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(63), motif(520:582) 63 IPR011129 Cold shock protein [Domain]
length(61), motif(521:581) 61 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(20), motif(530:549) 20 IPR019844 Cold-shock conserved site [Conserved_site]
length(81), motif(661:741) 81 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(64), motif(675:738) 64 IPR011129 Cold shock protein [Domain]
length(63), motif(675:737) 63 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(66), motif(677:742) 66 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(34), motif(756:789) 34 IPR024642 SUZ-C domain [Domain]