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H-Invitational ID: HIT000422344 Accession number: AK289547 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Cadherin-18; Cadherin-14; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
51 .. 51 C/T rs190234834 - 5'UTR
57 .. 57 G/A rs10941841 - 5'UTR
92 .. 92 A/G rs74334699 - 5'UTR
149 .. 149 G/A rs140678225 - 5'UTR
348 .. 348 A/C rs76342895 - 5'UTR
474 .. 474 T/C rs192286106 - 5'UTR
561 .. 561 C/A rs199740391 - 5'UTR
615 .. 615 A/G rs76617273 - 5'UTR
687 .. 687 T/G rs115113444 - 5'UTR
706 .. 706 G/T rs75155184 - 5'UTR
708 .. 708 G/A rs77404676 - 5'UTR
747 .. 747 G/T rs188257205 - 5'UTR
829 .. 829 C/T rs184401628 - 5'UTR
885 .. 885 A/G rs181353664 - 5'UTR
938 .. 938 C/T rs989316 + 5'UTR
1007 .. 1007 A/G rs148353712 - CDS Synonymous[Thr6Thr]
1018 .. 1018 G/C rs189671590 - CDS Nonsynonymous[Cys10Ser]
1080 .. 1080 A/G rs199518517 - CDS Nonsynonymous[Ile31Val]
1102 .. 1102 C/T rs143317499 - CDS Nonsynonymous[Thr38Ile]
1142 .. 1142 C/T rs200906154 - CDS Synonymous[Pro51Pro]
1263 ^ 1264 -/C rs35043931 - CDS
1346 .. 1346 G/A rs200449123 - CDS Synonymous[Glu119Glu]
1454 .. 1454 C/T rs148634634 - CDS Synonymous[Asn155Asn]
1516 .. 1516 C/T rs147043474 - CDS Nonsynonymous[Thr176Ile]
1530 .. 1530 G/A rs200034491 - CDS Nonsynonymous[Val181Met]
1571 .. 1571 C/T rs147239335 - CDS Synonymous[Ser194Ser]
1575 .. 1575 C/T rs200942294 - CDS Nonsynonymous[Arg196Trp]
1581 .. 1581 G/A rs184208296 - CDS Nonsynonymous[Val198Ile]
1595 .. 1595 C/T rs201475677 - CDS Synonymous[Leu202Leu]
1598 .. 1598 G/A rs12187552 - CDS Synonymous[Gln203Gln]
1652 .. 1652 A/T rs140543077 - CDS Nonsynonymous[Leu221Phe]
1665 .. 1665 A/G rs17856909 - CDS Nonsynonymous[Arg226Gly]
1711 .. 1711 T/C rs201835877 - CDS Nonsynonymous[Met241Thr]
1741 .. 1741 C/A rs201455871 - CDS Nonsynonymous[Ser251Tyr]
1782 .. 1782 C/A rs17852885 - CDS Nonsynonymous[Pro265Thr]
1892 .. 1892 T/C rs146786623 - CDS Synonymous[Ala301Ala]
1908 .. 1908 A/G rs145956610 - CDS Nonsynonymous[Ile307Val]
1980 .. 1980 T/C rs17285716 - CDS Synonymous[Leu331Leu]
2005 .. 2005 A/G rs140857588 - CDS Nonsynonymous[Lys339Arg]
2026 .. 2026 A/C rs150989071 - CDS Nonsynonymous[Asn346Thr]
2033 .. 2033 A/G rs142596747 - CDS Synonymous[Glu348Glu]
2059 .. 2059 G/A rs148450624 - CDS Nonsynonymous[Arg357His]
2094 .. 2094 A/G rs145527725 - CDS Nonsynonymous[Met369Val]
2098 .. 2098 T/C rs113557416 - CDS Nonsynonymous[Leu370Pro]
2142 .. 2142 A/G rs141062529 - CDS Nonsynonymous[Met385Val]
2147 .. 2147 T/G rs78589740 - CDS Synonymous[Pro386Pro]
2168 .. 2168 C/T rs140338437 - CDS Synonymous[Tyr393Tyr]
2178 .. 2178 A/C rs189886913 - CDS Nonsynonymous[Lys397Gln]
2189 .. 2189 C/T rs61316196 - CDS Synonymous[Thr400Thr]
2197 .. 2197 G/A rs144345399 - CDS Nonsynonymous[Gly403Asp]
2227 .. 2227 C/T rs17856908 - CDS Nonsynonymous[Thr413Ile]
2253 .. 2253 A/C rs143321024 - CDS Nonsynonymous[Asn422His]
2260 .. 2260 A/G rs139958887 - CDS Nonsynonymous[Asn424Ser]
2288 .. 2288 T/C rs150671146 - CDS Synonymous[Ile433Ile]
2311 .. 2311 G/T rs141966139 - CDS Nonsynonymous[Arg441Met]
2327 .. 2327 C/T rs148135067 - CDS Synonymous[Leu446Leu]
2328 .. 2328 G/A rs145743816 - CDS Nonsynonymous[Asp447Asn]
2406 .. 2406 A/C rs142033128 - CDS Nonsynonymous[Thr473Pro]
2431 .. 2431 T/C rs201826527 - CDS Nonsynonymous[Val481Ala]
2440 .. 2440 A/G rs111945633 - CDS Nonsynonymous[Asn484Ser]
2503 .. 2503 T/C rs138813470 - CDS Nonsynonymous[Val505Ala]
2542 .. 2542 C/A rs200523395 - CDS Nonsynonymous[Ala518Asp]
2576 .. 2576 A/G rs17852886 - CDS Synonymous[Glu529Glu]
2674 .. 2674 A/T rs144956131 - CDS Nonsynonymous[Asp562Val]
2693 .. 2693 T/C rs149115290 - CDS Synonymous[Ile568Ile]
2697 .. 2697 A/G rs145124695 - CDS Nonsynonymous[Ile570Val]
2745 .. 2745 A/C rs200903562 - CDS Nonsynonymous[Ile586Leu]
2762 .. 2762 C/T rs150370418 - CDS Synonymous[Cys591Cys]
2796 .. 2796 G/A rs201132238 - CDS Nonsynonymous[Glu603Lys]
2827 .. 2827 C/A rs199814117 - CDS Nonsynonymous[Thr613Lys]
2830 .. 2830 G/T rs148256786 - CDS Nonsynonymous[Gly614Val]
2833 .. 2833 C/T rs146116673 - CDS Nonsynonymous[Ala615Val]
2870 .. 2870 G/A rs112815048 - CDS Synonymous[Leu627Leu]
2893 .. 2893 C/A rs147821413 - CDS Nonsynonymous[Thr635Asn]
2907 .. 2907 A/G rs200080046 - CDS Nonsynonymous[Lys640Glu]
2944 .. 2944 G/A rs144313870 - CDS Nonsynonymous[Arg652Gln]
2995 .. 2995 A/G rs17852884 - CDS Nonsynonymous[Glu669Gly]
3052 .. 3052 G/A rs140353037 - CDS Nonsynonymous[Arg688Gln]
3098 .. 3098 A/G rs149332094 - CDS Synonymous[Thr703Thr]
3101 .. 3101 A/G rs181419243 - CDS Synonymous[Ser704Ser]
3119 .. 3119 A/G rs201249378 - CDS Nonsynonymous[Ile710Met]
3174 .. 3174 G/A rs138129088 - CDS Nonsynonymous[Val729Ile]
3244 .. 3244 C/T rs148398791 - CDS Nonsynonymous[Ser752Leu]
3259 .. 3259 C/T rs201996992 - CDS Nonsynonymous[Thr757Met]
3331 .. 3331 A/G rs144407594 - CDS Nonsynonymous[Tyr781Cys]
3342 .. 3342 G/C rs149640304 - CDS Nonsynonymous[Glu785Gln]
3539 .. 3539 G/A rs76978983 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
AluYh3 471 614 -
L2 615 739 -
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer