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H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID: HIT000388793 Accession number: BC126201 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Receptor-type tyrosine-protein phosphatase O isoform a precursor.
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
271 .. 271 T/C rs112922378 + CDS Nonsynonymous[Val34Ala]
278 .. 278 T/C rs17762440 + CDS Synonymous[Asp36Asp]
815 .. 815 C/T rs112427744 + CDS Synonymous[Pro215Pro]
852 .. 852 A/G rs117540301 + CDS Nonsynonymous[Ile228Val]
1280 .. 1280 C/G rs61754411 + CDS Nonsynonymous[Asn370Lys]
1497 .. 1497 G/A rs71459181 + CDS Nonsynonymous[Val443Ile]
1614 .. 1614 G/T rs78433620 + CDS AA-STOP[Glu482*]
1742 .. 1742 G/A rs74073225 + CDS Synonymous[Val524Val]
1796 .. 1796 T/C rs1050646 + CDS Synonymous[Gly542Gly]
1853 .. 1853 C/T rs111913342 + CDS Synonymous[Tyr561Tyr]
2225 .. 2225 T/C rs71581909 + CDS Synonymous[Asn685Asn]
2258 .. 2258 C/A rs6488782 + CDS Synonymous[Gly696Gly]
2270 .. 2270 C/T rs80309166 + CDS Synonymous[Asn700Asn]
2426 .. 2426 T/C rs36020879 + CDS Synonymous[Phe752Phe]
2428 .. 2428 A/G rs80173106 + CDS Nonsynonymous[Glu753Gly]
2576 .. 2576 T/C rs61741744 + CDS Synonymous[Ser802Ser]
2892 .. 2892 G/T rs11056560 + CDS Nonsynonymous[Gly908Cys]
3011 .. 3011 G/A rs61754412 + CDS Synonymous[Leu947Leu]
3206 .. 3206 G/A rs3748299 + CDS Synonymous[Gly1012Gly]
3431 .. 3431 C/T rs77872564 + CDS Synonymous[Asp1087Asp]
3581 .. 3581 T/A rs4356288 + CDS Nonsynonymous[Ser1137Arg]
3633 .. 3633 C/G rs61757814 + CDS Nonsynonymous[His1155Asp]
3651 .. 3651 T/A rs3190975 + CDS Nonsynonymous[Phe1161Ile]
3892 .. 3892 C/G rs113024827 + 3'UTR
4192 .. 4192 G/A rs80301530 + 3'UTR
4262 .. 4262 C/G rs73305557 + 3'UTR
4545 .. 4545 G/T rs73305558 + 3'UTR
4673 .. 4673 C/G rs1802754 + 3'UTR
4706 .. 4706 A/G rs7306091 + 3'UTR
4746 .. 4746 T/G rs74476689 + 3'UTR
4748 .. 4748 A/G rs117346438 + 3'UTR
4835 .. 4835 T/C rs73305559 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer