H-InvDB_9.0 released on May 27, 2015.
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Keyword
H-Inv ID (HIT)
H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
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Definition*
Data source ID
---
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H-Invitational ID:
HIT000340211
Accession number:
BC112082
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Protocadherin gamma-A1; PCDH-gamma-A1; Precursor;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Transcript original information
Accession number
BC112082.1
CAGE tag ID
NA
EST ID
NA
Clone Number
MGC:138287 IMAGE:8327550
Experimental resources
NBRC
;
HGPD
;
Sequence data provider
NA
Annotation project
NA
Length of cDNA
2616[bp] (No. of exon:1)[A:659 T:598 G:643 C:716]
Devision
HUM
Molecular type
mRNA
Library origin
Cell type
NA
Tissue type
Lung, PCR rescued clones
Develpmental stage
NA
Sequence quality information
CDS feature
Complete CDS
Kozak sequence
NA
PolyA
NA
Vector/adapter sequence
NA
Frame shift
NA
Remaining intron
NA
Splice site acceptor (NAGNAG)
NA
Transcript quality feature
NA
Notes
NA
CGATACCCTTGGTACTGGACTGGAAGAAAACTACGAAGTGAGAGAGCCAT GAAGATTCAGAAAAAGCTGACTGGCTGCAGCAGGCTGATGCTTCTGTGTC TTTCTCTGGAGCTGCTGTTGGAAGCTGGGGCTGGGAATATTCACTACTCA GTGCCGGAAGAGACAGACAAAGGTTCCTTCGTAGGCAACATCGCCAAGGA CCTAGGGCTGCAACCCCAGGAGCTGGCAGATGGCGGAGTCCGCATCGTCT CCAGAGGTAGGATGCCGCTTTTCGCTCTGAATCCTAGAAGTGGCAGCTTG ATCACCGCGCGCAGGATAGACCGGGAGGAGCTCTGCGCTCAGAGCATGCC GTGTCTCGTGAGTTTTAATATCCTTGTTGAGGATAAAATGAAGCTTTTTC CTGTTGAAGTAGAAATAATTGATATTAATGACAACACTCCCCAATTCCAG TTAGAGGAACTGGAGTTTAAAATGAATGAAATAACGACTCCAGGTACCAG AATCTCATTGCCTTTTGGGCAAGACCTTGATGTGGGTATGAACTCACTCC AGAGCTACCAACTCAGCTCTAACCCTCATTTCTCCCTGGATGTGCAACAG GGAGCCGATGGGCCTCAACATCCAGAGATGGTGCTGCAGAGTCCCTTAGA CAGAGAAGAAGAAGCTGTCCACCACCTCATCCTCACAGCTTCTGATGGGG GTGAACCAGTCCGTTCAGGGACCCTCAGAATTTACATTCAGGTGGTGGAT GCAAATGACAATCCTCCAGCATTTACTCAGGCACAATACCATATAAATGT CCCCGAAAACGTGCCGCTGGGTACTCAGCTGCTCATGGTAAATGCCACTG ACCCTGATGAGGGAGCCAATGGGGAAGTAACGTACTCCTTTCACAATGTA GACCACAGAGTGGCCCAAATATTTCGTTTAGATTCTTACACAGGAGAAAT ATCAAATAAAGAACCACTAGATTTCGAAGAATACAAAATGTATTCAATGG AAGTTCAAGCCCAGGATGGTGCGGGGCTCATGGCTAAAGTTAAGGTACTG ATCAAAGTTTTGGATGTAAATGATAATGCCCCAGAAGTGACCATCACCTC TGTCACCACTGCAGTTCCAGAAAACTTTCCTCCTGGGACCATAATTGCTC TTATCAGTGTGCATGACCAGGACTCAGGAGACAATGGCTACACCACATGT TTCATTCCTGGAAATTTACCCTTTAAATTGGAAAAGTTAGTTGATAATTA TTACCGTTTAGTGACTGAAAGAACACTGGACAGAGAACTTATCTCTGGGT ACAACATCACAATAACAGCAATAGACCAAGGAACTCCAGCTCTATCTACT GAAACTCACATTTCACTACTAGTGACAGATATCAATGACAACTCCCCAGT CTTCCATCAGGACTCCTACTCTGCCTACATTCCCGAAAACAACCCCAGAG GAGCCTCCATCTTCTCTGTGAGGGCCCACGACTTGGACAGCAATGAGAAT GCACAAATCACTTACTCCCTAATAGAGGACACTATCCAGGGGGCACCCCT ATCTGCCTACCTCTCCATCAACTCCGACACTGGGGTCCTGTATGCGCTGC GATCCTTCGACTATGAGCAGTTCCGGGACATGCAACTGAAAGTGATGGCG CGGGACAGTGGGGATCCGCCCCTCAGCAGCAACGTGTCTCTCAGCCTATT CCTGCTGGACCAGAACGACAACGCGCCCGAGATCCTGTACCCCGCCCTCC CCACAGATGGTTCTACCGGCGTGGAGCTGGCGCCCCTCTCCGCAGAGCCC GGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAGAGACTCGGGCCAGAA CGCCTGGCTGTCCTACCGCCTGCTCAAGGCCAGCGAGCCGGGACTCTTCT CGGTGGGTCTGCACACGGGCGAGGTGCGCACGGCGCGAGCCCTGCTGGAC AGAGACGCGCTCAAGCAGAGTCTCGTGGTGGCCGTCCAGGACCACGGCCA GCCCCCGCTCTCCGCCACTGTCACGCTCACCGTGGCCGTGGCCGACAGGA TCTCCGACATCCTGGCCGACCTGGGCAGCCTCGAGCCCTCCGCCAAACCC AACGATTCGGACCTCACTCTGTACCTGGTGGTGGCGGCGGCCGCGGTCTC CTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGCGCACAGGCTGCGGC GCTGGCACAAGTCACGTCTGCTACAGGCTTCGGGAGGCGGCTTAGCGAGC ATGCCCGGTTCGCACTTTGTGGGCGTGGACGGGGTTCGGGCTTTCCTGCA GACCTATTCCCACGAGGTCTCCCTCACTGCGGACTCGCGGAAGAGCCACC TGATTTTCCCCCAGCCCAACTATGCGGACACACTCATCAGCCAGGAGAGC TGTGAGAAAAAGGGTTTTCTATCAGCACCCCAGTCTTTACTTGAAGACAA AAAGGAACCATTTTCTCAGGTAAACTTTTGTGATGAATGTATCAGCTATC TAGAGAAAAATAATTCTTGATTTAACTTACTAGCGTTCGCTCTTTGCTAC AGATAGTTCTTCTAACCCATGTATCTTTGTAGCTTTTTATTACAAGTCCT GCAAAATCACGATTGA
Gene structure information
H-Inv cluster ID
HIX0216337
Genomic location
Chromosome
5
Location
5q31.3
Position
140710204- 140712819
Strand
+
Possible duplicated location(s)
NA
Gene structure
1 exon(s)
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:56114
;
KEGG GENES
KEGG GENES(56114)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links
H-DBAS;
G-integra
;
cDNA-genome alignment
;
Predicted CDS information
HIP ID
HIP000157503
Predicted CDS
49..2520; 823[aa]; Orientation:+1;
Codon Adaptation Index (CAI).
0.74
MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAK DLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSM PCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEITTPGT RISLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPL DREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTIT SVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDN YYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDINDNSP VFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAP LSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHG QPPLSATVTLTVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAV SCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMPGSHFVGVDGVRAFL QTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAPQSLLED KKEPFSQVNFCDECISYLEKNNS*
Motif information
a.a.
length
InterPro
Name
83
IPR013164
Cadherin, N-terminal [Domain]
75
IPR015919
Cadherin-like [Domain]
93
IPR002126
Cadherin [Domain]
101
IPR002126
Cadherin [Domain]
20
IPR002126
Cadherin [Domain]
59
IPR002126
Cadherin [Domain]
11
IPR020894
Cadherin conserved site [Conserved_site]
116
IPR002126
Cadherin [Domain]
108
IPR015919
Cadherin-like [Domain]
109
IPR002126
Cadherin [Domain]
93
IPR002126
Cadherin [Domain]
86
IPR002126
Cadherin [Domain]
11
IPR020894
Cadherin conserved site [Conserved_site]
104
IPR015919
Cadherin-like [Domain]
104
IPR002126
Cadherin [Domain]
30
IPR002126
Cadherin [Domain]
105
IPR002126
Cadherin [Domain]
92
IPR002126
Cadherin [Domain]
82
IPR002126
Cadherin [Domain]
13
IPR002126
Cadherin [Domain]
20
IPR002126
Cadherin [Domain]
11
IPR020894
Cadherin conserved site [Conserved_site]
105
IPR015919
Cadherin-like [Domain]
105
IPR002126
Cadherin [Domain]
105
IPR002126
Cadherin [Domain]
89
IPR002126
Cadherin [Domain]
82
IPR002126
Cadherin [Domain]
11
IPR020894
Cadherin conserved site [Conserved_site]
125
IPR015919
Cadherin-like [Domain]
115
IPR002126
Cadherin [Domain]
14
IPR002126
Cadherin [Domain]
110
IPR002126
Cadherin [Domain]
93
IPR002126
Cadherin [Domain]
87
IPR002126
Cadherin [Domain]
27
IPR002126
Cadherin [Domain]
18
IPR002126
Cadherin [Domain]
11
IPR020894
Cadherin conserved site [Conserved_site]
111
IPR015919
Cadherin-like [Domain]
102
IPR002126
Cadherin [Domain]
86
IPR002126
Cadherin [Domain]
82
IPR002126
Cadherin [Domain]
82
IPR002126
Cadherin [Domain]
Gene function information
H-Inv ID
HIT000340211
H-Inv cluster ID
HIX0216337
Accession number
BC112082.1
CAGE tag ID
NA
EST ID
NA
Transcript feature
NO;
Coding potential
Protein coding;
Definition
Similar to Protocadherin gamma-A1; PCDH-gamma-A1; Precursor;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
Q9Y5H4
) [Identity/coverage = 97.77%/86.68%] to Homo sapiens (Human). protein.
Experimental evidence
Protein evidence
PubMed ID
10380929
;
ALL
;
Gene family/group
H-Inv gene family/group ID
NA
Gene family/group name
NA
Evidence motif (InterPro) ID
NA
Gene symbol/name
HGNC symbol
NA
HGNC aliases
NA
HGNC name
NA
DDBJ
PCDHGA1
UniProt
PCDHGA1
EC number
NA
GGDB
(GlycoGene Database)
Gene symbol
NA
Familly
NA
Designation
NA
Expression
NA
KEGG metabolic pathway
NA
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000157503
No. of interaction
2
Interaction partner(s)
HIP000176774
;
HIP000247062
;
BIND
NA
DIP
NA
MINT
NA
HPRD
NA
IntAct
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:56114
;
KEGG GENES
KEGG GENES(56114)
;
GeneCard
NA
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Curation status
Auto-annotated
Notes
NA
Related H-InvDB links
Gene family;
Similarity Search Tool;
TACT
;
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.
NA
Gene ontology information
Molecular function
calcium ion binding (
GO:0005509
);
Biological process
cell adhesion (
GO:0007155
); homophilic cell adhesion (
GO:0007156
);
Cellular component
membrane (
GO:0016020
); plasma membrane (
GO:0005886
);
Subcellular localization information
Last modified:27-May-2015
WoLF PSORT
extracellular; plasma membrane; peroxisome; Other;
Target P
signal peptide
SOSUI
membrane protein
TMHMM
membrane protein
PTS1
Not targeted
Related H-InvDB links
LIFEdb;
JRE-1.4.0 or later is required.
Download JRE at
Sun's web site.
Protein structure information (GTOP)
Last modified:27-May-2015
Start
End
PDB_ID
E-value
Identity
Coverage
SCOP_ID
33
99
1f5aA1
6e-18
21.3
61/118
d.58.16.1
129
524
2nlzA1
3e-67
10.7
374/533
d.153.1.6
504
666
1o75A3
3e-14
7.5
152/191
b.120.1.1
Related H-InvDB links
GTOP
Gene expression information
Last modified:27-May-2015
Tissue-specific expression
NA
Probe
information
AceGene
AGhsA110108;
Affymetrix
GeneChip
HG-Focus
211875_x_at; 216343_at;
HG-U133
211875_x_at; 211876_x_at; 211879_x_at; 211880_x_at; 216343_at; 216352_x_at;
HG-U133A
211875_x_at; 211876_x_at; 211879_x_at; 211880_x_at; 216343_at; 216352_x_at;
HG-U133A_2
211875_x_at; 211876_x_at; 211879_x_at; 211880_x_at; 216343_at; 216352_x_at;
HG-U133B
NA
HG-U133_Plus_2
211875_x_at; 211876_x_at; 211879_x_at; 211880_x_at; 216343_at; 216352_x_at;
HG-U95
NA
HG-U95A
NA
HG-U95B
NA
HG-U95C
NA
HG-U95D
NA
HG-U95E
NA
HG-U95Av2
NA
HuEx-1_0
2832537; 2832538; 2832539; 2832540; 2832541; 2832542; 2878651;
HuGeneFL
NA
Agilent
Human 1A Oligo Microarray:PGID215
NA
Whole Human Genome Oligo Microarray:PGID247
A_23_P422044;
Related H-InvDB links
H-ANGEL;
DNAProbeLocator
;
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
61 .. 61
A/G
rs201710711
+
CDS
Nonsynonymous[Lys5Glu]
109 .. 109
G/C
rs141990511
+
CDS
Nonsynonymous[Glu21Gln]
135 .. 135
G/A
rs146187959
+
CDS
Synonymous[Gly29Gly]
201 .. 201
C/-
rs35733112
+
CDS
210 .. 210
G/A
rs139081093
+
CDS
Synonymous[Leu54Leu]
219 .. 219
G/A
rs115490425
+
CDS
Synonymous[Gln57Gln]
225 .. 225
G/A
rs199546998
+
CDS
Synonymous[Leu59Leu]
258 .. 258
T/C
rs72806843
+
CDS
Synonymous[Gly70Gly]
286 .. 286
A/G
rs139589644
+
CDS
Nonsynonymous[Arg80Gly]
340 .. 340
C/G
rs149721215
+
CDS
Nonsynonymous[Gln98Glu]
373 .. 373
C/T
rs145540103
+
CDS
Nonsynonymous[Leu109Phe]
481 .. 481
A/G
rs201568844
+
CDS
Nonsynonymous[Ile145Val]
502 .. 502
A/G
rs2472647
-
CDS
Nonsynonymous[Ile152Val]
557 .. 557
A/C
rs147001042
+
CDS
Nonsynonymous[Tyr170Ser]
575 .. 575
C/T
rs147674827
+
CDS
Nonsynonymous[Pro176Leu]
607 .. 607
G/A
rs76571170
+
CDS
Nonsynonymous[Asp187Asn]
629 .. 629
T/C
rs146641474
+
CDS
Nonsynonymous[Met194Thr]
691 .. 691
T/G
rs116468502
+
CDS
Nonsynonymous[Ser215Ala]
713 .. 713
G/A
rs139152286
+
CDS
Nonsynonymous[Arg222His]
736 .. 736
A/G
rs115370042
+
CDS
Nonsynonymous[Ile230Val]
791 .. 791
A/C
rs58894014
+
CDS
Nonsynonymous[His248Pro]
805 .. 805
G/A
rs140226913
+
CDS
Nonsynonymous[Glu253Lys]
854 .. 854
C/T
rs138254459
+
CDS
Nonsynonymous[Pro269Leu]
856 .. 856
G/A
rs149650270
+
CDS
Nonsynonymous[Asp270Asn]
865 .. 865
G/A
rs146145941
+
CDS
Nonsynonymous[Ala273Thr]
882 .. 882
G/A
rs115965295
+
CDS
Synonymous[Thr278Thr]
888 .. 888
C/A
rs150032730
+
CDS
Synonymous[Ser280Ser]
894 .. 894
C/G
rs17097185
+
CDS
Nonsynonymous[His282Gln]
925 .. 925
C/T
rs145926133
+
CDS
Nonsynonymous[Arg293Cys]
975 .. 975
C/T
rs148638556
+
CDS
Synonymous[Phe309Phe]
976 .. 976
G/A
rs201338329
+
CDS
Nonsynonymous[Glu310Lys]
1003 .. 1003
G/C
rs142099106
+
CDS
Nonsynonymous[Val319Leu]
1056 .. 1056
A/G
rs116275017
+
CDS
Synonymous[Lys336Lys]
1066 .. 1066
G/A
rs151199533
+
CDS
Nonsynonymous[Val340Ile]
1150 .. 1150
C/G
rs139139120
+
CDS
Nonsynonymous[Leu368Val]
1159 .. 1159
G/A
rs114855745
+
CDS
Nonsynonymous[Val371Met]
1176 .. 1176
A/T
rs115219843
+
CDS
Synonymous[Ser376Ser]
1243 .. 1243
G/A
rs116715037
+
CDS
Nonsynonymous[Asp399Asn]
1256 .. 1256
G/A
rs11575961
+
CDS
Nonsynonymous[Arg403His]
1344 .. 1344
A/G
rs114498220
+
CDS
Synonymous[Leu432Leu]
1392 .. 1392
C/T
rs111327215
+
CDS
Synonymous[Asn448Asn]
1427 .. 1427
A/G
rs147638996
+
CDS
Nonsynonymous[Tyr460Cys]
1528 .. 1528
G/A
rs142231440
+
CDS
Nonsynonymous[Asp494Asn]
1529 .. 1529
A/G
rs146367786
+
CDS
Nonsynonymous[Asp494Gly]
1535 .. 1535
T/C
rs145695495
+
CDS
Nonsynonymous[Ile496Thr]
1571 .. 1571
A/G
rs148959678
+
CDS
Nonsynonymous[Asn508Ser]
1583 .. 1583
G/A
rs116469894
+
CDS
Nonsynonymous[Gly512Glu]
1650 .. 1650
G/A
rs17097187
+
CDS
Synonymous[Ala534Ala]
1684 .. 1684
G/C
rs188815514
+
CDS
Nonsynonymous[Val546Leu]
1704 .. 1704
G/A
rs115095833
+
CDS
Synonymous[Leu552Leu]
1711 .. 1711
C/T
rs202093782
+
CDS
AA-STOP[Gln555*]
1721 .. 1721
A/G
rs142949915
+
CDS
Nonsynonymous[Asn558Ser]
1728 .. 1728
C/G
rs200405477
+
CDS
Synonymous[Pro560Pro]
1751 .. 1751
C/G
rs116679801
+
CDS
Nonsynonymous[Pro568Arg]
1768 .. 1768
G/C
rs115926650
+
CDS
Nonsynonymous[Gly574Arg]
1797 .. 1797
G/T
rs192894542
+
CDS
Nonsynonymous[Glu583Asp]
1876 .. 1876
A/C
rs142197826
+
CDS
Nonsynonymous[Lys610Gln]
1914 .. 1914
C/G
rs145945754
+
CDS
Nonsynonymous[His622Gln]
1971 .. 1971
T/C
rs7736087
+
CDS
Synonymous[Ser641Ser]
1995 .. 1995
C/T
rs138362456
+
CDS
Synonymous[His649His]
2007 .. 2007
G/T
rs62378403
+
CDS
Synonymous[Pro653Pro]
2007 .. 2007
G/T
rs112347072
+
CDS
Synonymous[Pro653Pro]
2008 .. 2008
C/T
rs149280390
+
CDS
Nonsynonymous[Leu654Phe]
2020 .. 2020
G/A
rs144494457
+
CDS
Nonsynonymous[Val658Ile]
2040 .. 2040
G/A
rs201668090
+
CDS
Synonymous[Val664Val]
2053 .. 2053
T/C
rs148466345
+
CDS
Nonsynonymous[Ser669Pro]
2067 .. 2067
C/T
rs145246231
+
CDS
Synonymous[Ala673Ala]
2096 .. 2096
A/T
rs62378404
+
CDS
Nonsynonymous[Lys683Ile]
2138 .. 2138
C/T
rs140634036
+
CDS
Nonsynonymous[Ala697Val]
2170 .. 2170
G/C
rs144483624
+
CDS
Nonsynonymous[Val708Leu]
2172 .. 2172
C/A
rs151257732
+
CDS
Synonymous[Val708Val]
2179 .. 2179
C/T
rs199711240
+
CDS
Synonymous[Leu711Leu]
2217 .. 2217
T/C
rs140436541
+
CDS
Synonymous[Arg723Arg]
2219 .. 2219
T/C
rs150021187
+
CDS
Nonsynonymous[Leu724Pro]
2223 .. 2223
A/G
rs145241441
+
CDS
Synonymous[Leu725Leu]
2248 .. 2248
A/G
rs141275772
+
CDS
Nonsynonymous[Ser734Gly]
2257 .. 2257
G/A
rs113017417
+
CDS
Nonsynonymous[Gly737Ser]
2258 .. 2258
G/T
rs200683011
+
CDS
Nonsynonymous[Gly737Val]
2365 .. 2365
C/T
rs200655156
+
CDS
Nonsynonymous[Pro773Ser]
2380 .. 2380
A/G
rs57846288
+
CDS
Nonsynonymous[Thr778Ala]
2382 .. 2382
A/G
rs116015775
+
CDS
Synonymous[Thr778Thr]
2383 .. 2383
C/T
rs11575968
+
CDS
Nonsynonymous[Leu779Phe]
2398 .. 2398
A/G
rs111873293
+
CDS
Nonsynonymous[Ser784Gly]
2413 .. 2413
G/A
rs143810163
+
CDS
Nonsynonymous[Gly789Ser]
2450 .. 2450
A/G
rs147043551
+
CDS
Nonsynonymous[Lys801Arg]
2492 .. 2492
T/C
rs115971518
+
CDS
Nonsynonymous[Ile815Thr]
2495 .. 2495
G/A
rs114133466
+
CDS
Nonsynonymous[Ser816Asn]
2547 .. 2547
C/G
rs141913516
+
3'UTR
2569 .. 2569
A/G
rs188101907
+
3'UTR
2609 .. 2609
A/G
rs182019371
+
3'UTR
2610 .. 2610
C/A
rs185548582
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
Type
Start
End
Strand
MamRTE1
1293
1341
+
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;