H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID: HIT000337479 Accession number: BC103927 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Protocadherin gamma-B1 isoform 2 precursor.
 
 

Motif information
ORF

length(810),orf(1:2433)
MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAK
DLGLSVRELPTRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECA
LEFETVAENPMNVFHVVVVIQDINDNAPRFVAKGIDLEICESALPGVKFS
LDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLLLEKPLDRE
HQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE
NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN
GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSN
QIPEDSDLGTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKL
VIAGALNREQTADYNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQ
ASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLEPRELLSY
VSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD
LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPL
SATATLHLIFADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFL
LAVILAIALRLRRSSSLDTEGCFQTGLCSKSGPGVPPNHSEGTLPYSYNL
CIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMVVCASNEDHKIAYDPSL
SSHVSFCKSS*
a.a.
length
InterPro Name
length(791), motif(1:791) 791 IPR015492 Protocadherin gamma [Family]
length(96), motif(27:122) 96 IPR015919 Cadherin-like [Domain]
length(103), motif(28:130) 103 IPR002126 Cadherin [Domain]
length(81), motif(29:109) 81 IPR013164 Cadherin, N-terminal [Domain]
length(98), motif(29:126) 98 IPR002126 Cadherin [Domain]
length(84), motif(45:128) 84 IPR002126 Cadherin [Domain]
length(20), motif(70:89) 20 IPR002126 Cadherin [Domain]
length(11), motif(118:128) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(109), motif(123:231) 109 IPR015919 Cadherin-like [Domain]
length(109), motif(127:235) 109 IPR002126 Cadherin [Domain]
length(109), motif(131:239) 109 IPR002126 Cadherin [Domain]
length(94), motif(137:230) 94 IPR002126 Cadherin [Domain]
length(86), motif(152:237) 86 IPR002126 Cadherin [Domain]
length(11), motif(227:237) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(104), motif(232:335) 104 IPR015919 Cadherin-like [Domain]
length(104), motif(236:339) 104 IPR002126 Cadherin [Domain]
length(30), motif(239:268) 30 IPR002126 Cadherin [Domain]
length(104), motif(240:343) 104 IPR002126 Cadherin [Domain]
length(90), motif(244:333) 90 IPR002126 Cadherin [Domain]
length(81), motif(261:341) 81 IPR002126 Cadherin [Domain]
length(13), motif(310:322) 13 IPR002126 Cadherin [Domain]
length(11), motif(331:341) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(105), motif(336:440) 105 IPR015919 Cadherin-like [Domain]
length(106), motif(340:445) 106 IPR002126 Cadherin [Domain]
length(105), motif(344:448) 105 IPR002126 Cadherin [Domain]
length(89), motif(350:438) 89 IPR002126 Cadherin [Domain]
length(82), motif(365:446) 82 IPR002126 Cadherin [Domain]
length(20), motif(427:446) 20 IPR002126 Cadherin [Domain]
length(11), motif(436:446) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(110), motif(441:550) 110 IPR015919 Cadherin-like [Domain]
length(14), motif(446:459) 14 IPR002126 Cadherin [Domain]
length(113), motif(446:558) 113 IPR002126 Cadherin [Domain]
length(110), motif(449:558) 110 IPR002126 Cadherin [Domain]
length(96), motif(453:548) 96 IPR002126 Cadherin [Domain]
length(87), motif(470:556) 87 IPR002126 Cadherin [Domain]
length(27), motif(506:532) 27 IPR002126 Cadherin [Domain]
length(18), motif(540:557) 18 IPR002126 Cadherin [Domain]
length(11), motif(546:556) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(112), motif(551:662) 112 IPR015919 Cadherin-like [Domain]
length(98), motif(574:671) 98 IPR002126 Cadherin [Domain]
length(89), motif(574:662) 89 IPR002126 Cadherin [Domain]
length(80), motif(578:657) 80 IPR002126 Cadherin [Domain]
length(82), motif(587:668) 82 IPR002126 Cadherin [Domain]