H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID: HIT000334852 Accession number: BC093877 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Protocadherin gamma-B5 isoform 2 precursor.
 
 

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000334852
H-Inv cluster ID Locus viewHIX0005252
Accession number BC093877.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition Protocadherin gamma-B5 isoform 2 precursor.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_115270)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Experimental evidence Protein evidence
PubMed ID NA
Gene family/group Gene family H-Inv gene family/group ID HIF0000005
Gene family/group name Putative Zinc finger, C2H2-type (IPR007087).
Evidence motif (InterPro) ID IPR007087
Gene symbol/name HGNC symbol PCDHGB5
HGNC aliases NA
HGNC name protocadherin gamma subfamily B, 5
DDBJ PCDHGB5
UniProt NA
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000060465
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_002588NM_003735NM_003736NM_014004NM_018912NM_018913NM_018914NM_018915NM_018916NM_018917NM_018918NM_018919NM_018920NM_018921NM_018922NM_018923NM_018924NM_018925NM_018926NM_018927NM_018928NM_018929NM_031993NM_032009NM_032011NM_032053NM_032054NM_032086NM_032087NM_032088NM_032089NM_032090NM_032091NM_032092NM_032094NM_032095NM_032096NM_032097NM_032098NM_032099NM_032100NM_032101NM_032402NM_032403NM_032406NM_032407
Ensembl ENST00000252085ENST00000252087ENST00000253812ENST00000305759ENST00000306593ENST00000308177ENST00000378105ENST00000394576ENST00000398587ENST00000398594ENST00000398604ENST00000398610ENST00000517417ENST00000517434ENST00000518069ENST00000518325ENST00000518882ENST00000520790ENST00000522605ENST00000523390ENST00000528330
Entrez Gene Entrez Gene ID:56101
KEGG GENES KEGG GENES(56101)
GeneCard GeneCardPCDHGB5*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Putative Zinc finger, C2H2-type (IPR007087). Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA