H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000327860 Accession number: Z69891 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Non-protein-coding transcript, uncharacterized transcript.
 
 

Transcript original information
Accession number Z69891.1
CAGE tag ID NA
EST ID NA
Clone Number ICRFp507G10101
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ; Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (PTGES3) ; Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (PTGES3);
Sequence data provider NA
Annotation project NA
Length of cDNA 201[bp] (No. of exon:1)[A:38 T:26 G:63 C:74]
Devision HUM
Molecular type mRNA
Library origin Cell type NA
Tissue type brain
Develpmental stage fetus
Mini-G
Sequence quality information
CDS feature NA
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) NA
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0201862
Genomic location  G-integra Help Chromosome 12
Location 12q13.3
Position 57081809- 57082010
Strand -
Possible duplicated location(s) NA
Gene structure 1 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:10728
KEGG GENES KEGG GENES(10728)
GeneCard GeneCardPTGES3*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000327860
H-Inv cluster ID Locus viewHIX0201862
Accession number Z69891.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Classification of non-protein-coding transcripts Classification: Uncharacterized transcript
Type: NA
NA
Experimental evidence NA
PubMed ID NA
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol PTGES3
HGNC aliases NA
HGNC name prostaglandin E synthase 3 (cytosolic)
DDBJ NA
UniProt NA
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID NA
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:10728
KEGG GENES KEGG GENES(10728)
GeneCard GeneCardPTGES3*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA


Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
22 .. 22 C/A rs193025334 -
144 .. 144 A/G rs11550107 +
176 .. 176 G/A rs11550106 +
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer