H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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H-Invitational ID: HIT000326960 Accession number: Z34278 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Conserved hypothetical protein.

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Transcript original information Accession number Z34278.1 CAGE tag ID NA EST ID NA Clone Number JER58 Experimental resources   NBRC ; HGPD ; Antibody (MUC5AC) ; Catalog (MUC5AC); Sequence data provider NA Annotation project NA Length of cDNA 837[bp] (No. of exon:0)[A:221 T:163 G:102 C:351] Devision HUM Molecular type mRNA Library origin Cell type NA Tissue type Tracheobronchial mucosa Develpmental stage NA

Sequence quality information CDS feature N/C-truncated Kozak sequence NA PolyA NA Vector/adapter sequence NA Frame shift NA Remaining intron NA Splice site acceptor (NAGNAG) NA Transcript quality feature NA Notes NA

CCCTCGGCTCCTACAACCAGCACAACTTCTGGTCCTGGAACTACCCCAAG CCCTGTTCCCACGACCAGCACAACCTCTGCCCCTACAACAAGAACAACTT CTGCTCCTAAAAGCAGCACAACCTCTGCCGCTACAACCAGCACAACCTCT GGTCCTGAAACTACTCCTAGACCTGTTCCTACCACCAGCACAACCTCTTC TCCTACAACCAGCACAACCTCTGCTCCTACAACCAGCACAACCTCTGCTT CTACAACCAGCACAACCTCTGGTGCTGGAACTACTCCCAGCCCTGTTCCC ACCACCAGCACAACCTCTGCTCCTACAACCAGAACAACCTCTGCCCCTAT AAGCAGCACAACCTCTGCCACTACAACCAGCACAACCTCTGGTCCTGGAA CTACTCCCAGCCCTGTTCCTACCACGAGCACAACCTCTGCTCCTACAACC AGCACAACCTCTGGTCCTGGAACTACTCCCAGTGCTGTTCCCACCACCAG TATAACCTCTGTACCTACAACCAGTACAAACTCTGCCCCTATAAGCAGCA CAACCTCTGCCACTACAACCAGTAGAATCTCTGGTCCTGAAACTACTCCC AGCCCTGTTCCTACCGCCAGCACAACCTCTGCTTCTACAACTAGCACAAC CTCTGGTCCTGGAACTACTCCCAGCCCTGTTCCTACCACCAGCACAATCT CTGTTCCTACCACCAGCACAACTTCTGCTTCTACAACCAGCACAACCTCT GCTTCTACAACCAGCACAACCTCTGGTCCTGGAACTACTCCCAGCCCTGT TCCCACCACCAGCACAACCTCTGCTCCCACAACAAGC

Gene structure information

H-Inv cluster ID		HIX0159179
Genomic location	Chromosome	UM
	Location	NA
	Position	NA
	Strand	NA
Possible duplicated location(s)		NA
Gene structure		exon(s)
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:4586;
	KEGG GENES	KEGG GENES(4586);
	GeneCard	MUC5AC;  *GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome alignment;

Predicted CDS information HIP ID HIP000188611 Predicted CDS 1..837;  279[aa];  Orientation:+1;  Codon Adaptation Index (CAI). Database links RefSeq NA UniProt Q14888;  CCDS NA

PSAPTTSTTSGPGTTPSPVPTTSTTSAPTTRTTSAPKSSTTSAATTSTTS GPETTPRPVPTTSTTSSPTTSTTSAPTTSTTSASTTSTTSGAGTTPSPVP TTSTTSAPTTRTTSAPISSTTSATTTSTTSGPGTTPSPVPTTSTTSAPTT STTSGPGTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP SPVPTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTS ASTTSTTSGPGTTPSPVPTTSTTSAPTTS

Gene function information

H-Inv ID		HIT000326960
H-Inv cluster ID		HIX0159179
Accession number		Z34278.1
CAGE tag ID		NA
EST ID		NA
Transcript feature		Representative transcript;
Coding potential		Protein coding;
Definition		Conserved hypothetical protein.
Similarity category		Category: Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Experimental evidence		NA
PubMed ID		NA
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	MUC5AC
	HGNC aliases	"mucin 5, subtypes A and C, tracheobronchial/gastric"
	HGNC name	mucin 5AC, oligomeric mucus/gel-forming
	DDBJ	MUC5AC
	UniProt	NA
EC number		NA
GGDB (GlycoGene Database)	Gene symbol	NA
	Familly	NA
	Designation	NA
	Expression	NA
KEGG metabolic pathway		NA
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000188611
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NA
	Ensembl	NA
	Entrez Gene	Entrez Gene ID:4586;
	KEGG GENES	KEGG GENES(4586);
	GeneCard	MUC5AC;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Curation status		Human curated
Notes		NA
Related H-InvDB links		Gene family;  Similarity Search Tool;  TACT;

fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.

NA

Subcellular localization information

Last modified:20-Apr-2012

WoLF PSORT	nuclear;  extracellular;
Target P	Not predicted
SOSUI	soluble protein
TMHMM	soluble protein
PTS1
Related H-InvDB links	LIFEdb;  JRE-1.4.0 or later is required. Download JRE at Sun's web site.