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H-Invitational ID: HIT000249675 Accession number: AK131387 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Flap endonuclease GEN homolog 1; EC=3.1.-.-;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
12 .. 12 G/A rs183763115 + 5'UTR
62 .. 62 A/G rs200070178 + 5'UTR
118 .. 118 A/T rs139372712 + CDS Nonsynonymous[Gln15His]
157 .. 157 A/T rs147110059 + CDS Synonymous[Ala28Ala]
158 .. 158 G/A rs181124955 + CDS Nonsynonymous[Val29Ile]
215 .. 215 G/A rs202068919 + CDS Nonsynonymous[Val48Ile]
269 .. 269 A/G rs141837989 + CDS Nonsynonymous[Met66Val]
330 .. 330 T/A rs148443734 + CDS Nonsynonymous[Ile86Lys]
347 .. 347 A/T rs1812152 + CDS Nonsynonymous[Thr92Ser]
350 .. 350 C/T rs201492858 + CDS Nonsynonymous[Arg93Trp]
376 .. 376 G/T rs144005627 + CDS Nonsynonymous[Trp101Cys]
437 .. 437 G/A rs201084834 + CDS Nonsynonymous[Glu122Lys]
463 .. 463 G/C rs200681783 + CDS Nonsynonymous[Gln130His]
476 .. 476 G/T rs199545866 + CDS Nonsynonymous[Ala135Ser]
481 .. 481 A/G rs111388449 + CDS Synonymous[Glu136Glu]
501 .. 501 A/G rs16981869 + CDS Nonsynonymous[Asn143Ser]
542 .. 542 G/T rs139099020 + CDS Nonsynonymous[Asp157Tyr]
562 .. 562 C/T rs143444612 + CDS Synonymous[Ala163Ala]
567 .. 567 C/A rs150961964 + CDS Nonsynonymous[Thr165Asn]
568 .. 568 T/C rs201825923 + CDS Synonymous[Thr165Thr]
623 .. 623 A/T rs140068646 + CDS Nonsynonymous[Met184Leu]
639 .. 639 G/A rs116772931 + CDS Nonsynonymous[Ser189Asn]
657 ^ 658 -/G rs34478641 + CDS
680 .. 680 A/G rs10177628 + CDS Nonsynonymous[Ile203Val]
693 .. 693 G/C rs138511510 + CDS Nonsynonymous[Cys207Ser]
750 .. 750 T/C rs143219130 + CDS Nonsynonymous[Ile226Thr]
792 .. 792 G/A rs189766183 + CDS Nonsynonymous[Arg240Gln]
822 .. 822 C/T rs141482726 + CDS Nonsynonymous[Pro250Leu]
860 .. 860 G/A rs199991451 + CDS Nonsynonymous[Val263Ile]
876 .. 876 G/T rs139945353 + CDS Nonsynonymous[Gly268Val]
896 .. 896 C/T rs146276503 + CDS Nonsynonymous[Arg275Cys]
897 .. 897 G/A rs202239270 + CDS Nonsynonymous[Arg275His]
931 .. 931 T/C rs201202527 + CDS Synonymous[Tyr286Tyr]
948 .. 948 A/G rs149884551 + CDS Nonsynonymous[Tyr292Cys]
977 .. 977 C/T rs202192107 + CDS Nonsynonymous[Arg302Cys]
978 .. 978 G/A rs148607792 + CDS Nonsynonymous[Arg302His]
1002 .. 1002 A/G rs300175 + CDS Nonsynonymous[Asn310Ser]
1061 .. 1061 G/A rs115591812 + CDS Nonsynonymous[Glu330Lys]
1087 .. 1087 C/T rs150264679 + CDS Synonymous[Asn338Asn]
1136 .. 1136 T/C rs148928887 + CDS Synonymous[Leu355Leu]
1143 .. 1143 A/G rs201049373 + CDS Nonsynonymous[Gln357Arg]
1154 .. 1154 C/T rs200275164 + CDS Nonsynonymous[Leu361Phe]
1181 .. 1181 T/G rs201488023 + CDS Nonsynonymous[Tyr370Asp]
1205 .. 1205 C/T rs141832116 + CDS Nonsynonymous[Leu378Phe]
1310 .. 1310 T/C rs199769297 + CDS Nonsynonymous[Cys413Arg]
1414 .. 1414 A/G rs16983864 + CDS Synonymous[Ala447Ala]
1462 .. 1462 T/G rs201334007 + CDS Nonsynonymous[Ile463Met]
1503 .. 1503 A/G rs148028719 + CDS Nonsynonymous[Asn477Ser]
1599 .. 1599 C/G rs150586336 + CDS Nonsynonymous[Ser509Trp]
1603 .. 1603 G/T rs144151088 + CDS Synonymous[Gly510Gly]
1608 .. 1608 C/T rs192489738 + CDS Nonsynonymous[Ser512Phe]
1711 .. 1711 T/A rs61762986 + CDS Synonymous[Ser546Ser]
1747 .. 1747 T/A rs138268141 + CDS Synonymous[Ala558Ala]
1789 .. 1789 C/T rs151314688 + CDS Synonymous[Thr572Thr]
1833 .. 1833 C/T rs112224689 + CDS Nonsynonymous[Thr587Ile]
1871 .. 1871 G/C rs200602120 + CDS Nonsynonymous[Ala600Pro]
1918 .. 1918 A/G rs202033525 + CDS Synonymous[Glu615Glu]
1970 .. 1970 T/G rs145621452 + CDS Nonsynonymous[Ser633Ala]
1995 .. 1995 C/G rs201918587 + CDS Nonsynonymous[Ala641Gly]
2028 .. 2028 A/C rs141313079 + CDS Nonsynonymous[Asp652Ala]
2044 .. 2044 G/A rs300168 - CDS Synonymous[Glu657Glu]
2103 .. 2103 G/A rs200843544 + CDS Nonsynonymous[Arg677Gln]
2112 .. 2112 T/C rs300169 + CDS Nonsynonymous[Ile680Thr]
2128 .. 2128 T/C rs144098391 + CDS Synonymous[Pro685Pro]
2137 .. 2137 T/C rs139429589 + CDS Synonymous[Asn688Asn]
2150 .. 2150 G/A rs150533023 + CDS Nonsynonymous[Val693Ile]
2171 .. 2171 A/G rs149815077 + CDS Nonsynonymous[Ile700Val]
2184 .. 2184 A/C rs200000475 + CDS Nonsynonymous[Lys704Thr]
2199 .. 2199 C/G rs201307842 + CDS Nonsynonymous[Ala709Gly]
2335 .. 2335 C/T rs111823913 + CDS Synonymous[Val754Val]
2356 .. 2356 A/G rs113795529 + CDS Synonymous[Thr761Thr]
2425 .. 2425 A/G rs139744901 + CDS Synonymous[Gln784Gln]
2454 .. 2454 G/C rs201939375 + CDS Nonsynonymous[Ser794Thr]
2508 .. 2508 A/G rs144368291 + CDS Nonsynonymous[Lys812Arg]
2518 .. 2518 C/T rs148781334 + CDS Synonymous[Tyr815Tyr]
2522 .. 2522 A/G rs77374434 + CDS Nonsynonymous[Thr817Ala]
2588 .. 2588 A/G rs113873109 + CDS Nonsynonymous[Lys839Glu]
2600 .. 2600 C/T rs183886409 + CDS Nonsynonymous[Pro843Ser]
2692 .. 2692 T/G rs57936182 + CDS Nonsynonymous[Ser873Arg]
2703 .. 2703 C/A rs143372639 + CDS Nonsynonymous[Ser877Tyr]
2715 .. 2715 A/C rs201891945 + CDS Nonsynonymous[His881Pro]
2717 .. 2717 A/G rs77424145 + CDS Nonsynonymous[Lys882Glu]
2725 .. 2725 A/C rs141534568 + CDS Nonsynonymous[Glu884Asp]
2728 .. 2728 C/A rs190550780 + CDS Nonsynonymous[Asn885Lys]
2759 .. 2759 C/A rs182439530 + CDS Nonsynonymous[Pro896Thr]
2765 .. 2765 T/C rs17315702 + CDS Nonsynonymous[Cys898Arg]
2766 .. 2766 G/A rs141519917 + CDS Nonsynonymous[Cys898Tyr]
2816 .. 2816 G/T rs187137726 + 3'UTR
2839 .. 2839 C/T rs192261917 + 3'UTR
2905 .. 2905 C/G rs78136924 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
OldhAT1 1494 1536 +
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer