H-InvDB - Transcript view HIT000193903_05

H-InvDB x AHG DB

Transcript view

	H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID:	HIT000193903_05	Accession number:	L46876	Created date:	26-Mar-2013	Last modified:	20-Apr-2012
Definition:	Non-protein-coding transcript, uncharacterized transcript.

[CDS]
provide predicted CDS, orientation, codon adaptation
index (CAI) and translation.

[Motif]
provide location, ID and descriptions of functional motifs (InterPro)

[GO]
provide gene ontology (GO) annotation of molecular
function, biological process and cellular component.

[Subcellular loc.]
provide subcellular localization prediction by
WolfPSORT, Target P, SOSUI, TMHMM and PTS1

[Protein structure]
provide assigned PDB and SCOP IDs by reverse
PSI-BLAST, and summary prediction of 3D structure by GTOP

[Expression]
provide tissue-specific expression in 10 tissue
categories determined by iAFLP data (JBIRC)

[Disease info.]
provide known disease-related genes and co-localized
orphan pathology with the name of the disease
and OMIM ID

[Evolutionary info.]
provide orthologs relationships, phylogenic
trees and sequence alignments

Disease/pathology information

Last modified:20-Apr-2012

Disease relation		Disease name: {Celiac disease, susceptibility to} (212750);
Related information in OMIM		OMIM ID: 146880; Title: MAJOR HISTOCOMPATIBILITY COMPLEX, CLASS II, DQ ALPHA-1
Co-localized orphan diseases		OMIM ID: 122550; 143400; 604519; 608545; 610294; 611724; 612558;
Disease related mutation		MutationView: 146880; JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Literature-Extracted GENe-Disease Associations (LEGENDA)	Gene name	NA
	Disease	NA
	Substance	NA
Related H-InvDB links		DiseaseInfo Viewer; LEGENDA;