H-InvDB x AHG DB
Transcript view
H-InvDB_8.3 released on March 26, 2013.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
Locus viewLocus view Protein view Protein view G-integraG-integra DiseaseInfo ViewerDiseaseInfo Viewer H-ANGELH-ANGEL EvolaEvola PPI viewerPPI view Gene Family/GroupGene Family/Group Hyperlink managemnet system (All databases)Hyperlink MS
H-Invitational ID: HIT000192062 Accession number: L11373 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Protocadherin gamma-C3; PCDH-gamma-C3; Protocadherin-2; Protocadherin-43; PC-43; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
29 .. 29 C/A rs72790062 + 5'UTR
348 .. 348 G/A rs61279034 + CDS Synonymous[Glu78Glu]
476 .. 476 T/A rs115237553 + CDS Nonsynonymous[Val121Glu]
696 .. 696 G/C rs2075661 + CDS Synonymous[Ala194Ala]
769 .. 769 G/C rs112156044 + CDS Nonsynonymous[Gly219Arg]
780 .. 780 A/G rs115808055 + CDS Synonymous[Pro222Pro]
1257 .. 1257 C/T rs60063068 + CDS Synonymous[Gly381Gly]
1706 .. 1706 A/G rs76333877 + CDS Nonsynonymous[Glu531Gly]
2142 .. 2142 C/T rs76259032 + CDS Synonymous[Phe676Phe]
2202 .. 2202 T/C rs2530209 - CDS Synonymous[Ser696Ser]
2226 .. 2226 C/T rs1423148 + CDS Synonymous[Phe704Phe]
2414 .. 2414 G/C rs2530208 - CDS Nonsynonymous[Arg767Pro]
2416 .. 2416 A/G rs2547556 + CDS Nonsynonymous[Ser768Gly]
2494 .. 2494 G/A rs77463374 + CDS Nonsynonymous[Val794Met]
2746 .. 2746 G/A rs114669158 + CDS Nonsynonymous[Ala878Thr]
2757 .. 2757 A/G rs2233612 + CDS Synonymous[Gly881Gly]
2779 .. 2779 G/A rs116366286 + CDS Nonsynonymous[Val889Met]
2792 .. 2792 G/A rs61749029 + CDS Nonsynonymous[Arg893His]
3048 .. 3048 A/G rs76613492 + 3'UTR
3094 .. 3094 C/T rs115159796 + 3'UTR
3355 .. 3355 G/C rs4912608 + 3'UTR
3612 .. 3612 C/T rs113814137 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer