H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000071760 Accession number: AF152334 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protocadherin gamma-B5; PCDH-gamma-B5; Precursor;
 
 

Motif information
ORF

length(923),orf(1:2772)
MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNL
ATDLGFSVQELPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKP
ACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGT
RFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTL
DREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVS
LRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQIFSLNSKSGEITTQ
KKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLE
MILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKL
VTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQ
ASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASY
VSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGD
RNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPL
SATATLHLVFADSLQEVLPDITDRPVPSDPQAELQFYLVVALALISVLFL
LAVILAVALRLRRSSSPAAWSCFQPGLCVKSGPVVPPNYSQGTLPYSYNL
CVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSESTSHPELQ
APPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEA
ADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
KRDGKAPAGGNGNKKKSGKKEKK*
a.a.
length
InterPro Name
length(82), motif(31:112) 82 IPR013164 Cadherin, N-terminal [Domain]
length(94), motif(32:125) 94 IPR015919 Cadherin-like [Domain]
length(93), motif(32:124) 93 IPR002126 Cadherin [Domain]
length(97), motif(37:133) 97 IPR002126 Cadherin [Domain]
length(86), motif(46:131) 86 IPR002126 Cadherin [Domain]
length(20), motif(73:92) 20 IPR002126 Cadherin [Domain]
length(11), motif(121:131) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(114), motif(125:238) 114 IPR002126 Cadherin [Domain]
length(108), motif(127:234) 108 IPR015919 Cadherin-like [Domain]
length(109), motif(134:242) 109 IPR002126 Cadherin [Domain]
length(95), motif(139:233) 95 IPR002126 Cadherin [Domain]
length(86), motif(155:240) 86 IPR002126 Cadherin [Domain]
length(11), motif(230:240) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(100), motif(236:335) 100 IPR015919 Cadherin-like [Domain]
length(101), motif(239:339) 101 IPR002126 Cadherin [Domain]
length(30), motif(242:271) 30 IPR002126 Cadherin [Domain]
length(101), motif(243:343) 101 IPR002126 Cadherin [Domain]
length(87), motif(247:333) 87 IPR002126 Cadherin [Domain]
length(78), motif(264:341) 78 IPR002126 Cadherin [Domain]
length(13), motif(310:322) 13 IPR002126 Cadherin [Domain]
length(11), motif(331:341) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(104), motif(337:440) 104 IPR015919 Cadherin-like [Domain]
length(106), motif(340:445) 106 IPR002126 Cadherin [Domain]
length(97), motif(352:448) 97 IPR002126 Cadherin [Domain]
length(86), motif(353:438) 86 IPR002126 Cadherin [Domain]
length(82), motif(365:446) 82 IPR002126 Cadherin [Domain]
length(20), motif(427:446) 20 IPR002126 Cadherin [Domain]
length(11), motif(436:446) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(123), motif(437:559) 123 IPR015919 Cadherin-like [Domain]
length(113), motif(446:558) 113 IPR002126 Cadherin [Domain]
length(14), motif(446:459) 14 IPR002126 Cadherin [Domain]
length(110), motif(449:558) 110 IPR002126 Cadherin [Domain]
length(96), motif(453:548) 96 IPR002126 Cadherin [Domain]
length(87), motif(470:556) 87 IPR002126 Cadherin [Domain]
length(27), motif(506:532) 27 IPR002126 Cadherin [Domain]
length(18), motif(540:557) 18 IPR002126 Cadherin [Domain]
length(11), motif(546:556) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(109), motif(552:660) 109 IPR015919 Cadherin-like [Domain]
length(98), motif(574:671) 98 IPR002126 Cadherin [Domain]
length(89), motif(574:662) 89 IPR002126 Cadherin [Domain]
length(80), motif(578:657) 80 IPR002126 Cadherin [Domain]
length(82), motif(587:668) 82 IPR002126 Cadherin [Domain]