H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000071759
Accession number:
AF152333
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Protocadherin gamma-B4; PCDH-gamma-B4; Cadherin-20; Fibroblast cadherin-2; Precursor;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
52 .. 52
T/G
rs200817766
+
CDS
Nonsynonymous[Phe18Val]
451 .. 451
C/A
rs67622091
+
CDS
Synonymous[Arg151Arg]
506 .. 506
A/C
rs202036029
+
CDS
Nonsynonymous[Asn169Thr]
538 .. 538
C/T
rs68033444
+
CDS
Synonymous[Leu180Leu]
540 .. 540
G/A
rs77505166
+
CDS
Synonymous[Leu180Leu]
681 .. 681
G/C
rs149167054
+
CDS
Nonsynonymous[Gln227His]
682 .. 682
A/T
rs145399301
+
CDS
Nonsynonymous[Ile228Leu]
695 .. 695
T/A
rs113550354
+
CDS
Nonsynonymous[Val232Glu]
767 .. 767
A/G
rs186708822
+
CDS
Nonsynonymous[Tyr256Cys]
818 .. 818
T/G
rs201901866
+
CDS
Nonsynonymous[Val273Gly]
857 .. 857
A/C
rs200109598
+
CDS
Nonsynonymous[Gln286Pro]
984 .. 984
A/G
rs138074064
+
CDS
Synonymous[Gln328Gln]
991 .. 991
G/T
rs201053346
+
CDS
Nonsynonymous[Val331Leu]
1057 .. 1057
C/T
rs191165529
+
CDS
Synonymous[Leu353Leu]
1071 .. 1071
C/T
rs183330174
+
CDS
Synonymous[Asp357Asp]
1126 .. 1126
C/G
rs141101630
+
CDS
Nonsynonymous[His376Asp]
1129 .. 1129
A/G
rs187666474
+
CDS
Nonsynonymous[Asn377Asp]
1225 .. 1225
G/A
rs144915863
+
CDS
Nonsynonymous[Asp409Asn]
1258 .. 1258
G/A
rs72790030
+
CDS
Nonsynonymous[Val420Ile]
1273 .. 1273
C/T
rs192156139
+
CDS
Nonsynonymous[Arg425Trp]
1316 .. 1316
A/G
rs202220616
+
CDS
Nonsynonymous[His439Arg]
1390 .. 1390
C/G
rs183257097
+
CDS
Nonsynonymous[Pro464Ala]
1393 .. 1393
C/T
rs148279287
+
CDS
Nonsynonymous[Pro465Ser]
1472 .. 1472
C/T
rs188323445
+
CDS
Nonsynonymous[Ala491Val]
1490 .. 1490
G/A
rs192606668
+
CDS
Nonsynonymous[Arg497Gln]
1545 .. 1545
G/A
rs201662463
+
CDS
Synonymous[Gln515Gln]
1555 .. 1555
G/T
rs201120335
+
CDS
Nonsynonymous[Asp519Tyr]
1632 .. 1632
G/C
rs200072718
+
CDS
Synonymous[Val544Val]
1644 .. 1644
G/T
rs200792478
+
CDS
Synonymous[Val548Val]
1652 .. 1652
A/G
rs199537783
+
CDS
Nonsynonymous[Asp551Gly]
1677 .. 1677
G/A
rs115696241
+
CDS
Synonymous[Arg559Arg]
1775 .. 1775
T/G
rs201900584
+
CDS
Nonsynonymous[Val592Gly]
1838 .. 1838
G/C
rs141134077
+
CDS
Nonsynonymous[Gly613Ala]
1842 .. 1842
C/T
rs150721796
+
CDS
Synonymous[Leu614Leu]
1874 .. 1874
G/T
rs201153580
+
CDS
Nonsynonymous[Arg625Leu]
1987 .. 1987
G/C
rs199638280
+
CDS
Nonsynonymous[Ala663Pro]
2125 .. 2125
A/G
rs200734314
+
CDS
Nonsynonymous[Ile709Val]
2339 .. 2339
G/T
rs137959577
+
CDS
Nonsynonymous[Gly780Val]
2434 .. 2434
G/A
rs201391904
+
CDS
Nonsynonymous[Ala812Thr]
2446 .. 2446
G/A
rs200418116
+
CDS
Nonsynonymous[Gly816Ser]
2502 .. 2502
T/C
rs149352680
+
CDS
Synonymous[Phe834Phe]
2601 .. 2601
C/T
rs143630962
+
CDS
Synonymous[Ser867Ser]
2602 .. 2602
G/A
rs114669158
+
CDS
Nonsynonymous[Ala868Thr]
2605 .. 2605
C/T
rs148119281
+
CDS
Nonsynonymous[Arg869Cys]
2610 .. 2610
C/T
rs141873183
+
CDS
Synonymous[Tyr870Tyr]
2613 .. 2613
A/G
rs2233612
+
CDS
Synonymous[Gly871Gly]
2635 .. 2635
G/A
rs116366286
+
CDS
Nonsynonymous[Val879Met]
2648 .. 2648
G/A
rs61749029
+
CDS
Nonsynonymous[Arg883His]
2675 .. 2675
A/G
rs201009079
+
CDS
Nonsynonymous[Asn892Ser]
2691 .. 2691
C/T
rs143362044
+
CDS
Synonymous[Asn897Asn]
2734 .. 2734
G/A
rs200541479
+
CDS
Nonsynonymous[Gly912Ser]
2750 .. 2750
C/T
rs202071188
+
CDS
Nonsynonymous[Ser917Leu]
2769 .. 2769
G/A
rs147534370
+
CDS
Synonymous[Lys923Lys]
2801 .. 2801
C/T
rs201024828
+
3'UTR
2802 .. 2802
G/A
rs2233613
+
3'UTR
2907 .. 2907
G/A
rs76613492
+
3'UTR
2963 .. 2963
T/C
rs115159796
+
3'UTR
2973 .. 2973
C/A
rs191106767
+
3'UTR
3209 .. 3209
C/A
rs146235929
+
3'UTR
3227 .. 3227
G/C
rs4912608
+
3'UTR
3302 .. 3302
T/G
rs148447880
+
3'UTR
3464 .. 3464
G/A
rs142624814
+
3'UTR
3485 .. 3485
T/C
rs113814137
+
3'UTR
3491 .. 3491
C/T
rs150999050
+
3'UTR
3498 .. 3498
T/G
rs187622252
+
3'UTR
3687 .. 3687
A/G
rs192947391
+
3'UTR
3770 .. 3770
T/C
rs140884268
+
3'UTR
3793 .. 3793
G/A
rs111365449
+
3'UTR
3984 .. 3984
A/G
rs78180647
+
3'UTR
4052 .. 4052
G/A
rs185198109
+
3'UTR
4145 .. 4145
C/T
rs147780926
+
3'UTR
4438 .. 4438
C/T
rs141207714
+
3'UTR
4457 .. 4457
G/T
rs189734474
+
3'UTR
4513 .. 4513
C/T
rs112402554
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;