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H-Invitational ID: HIT000071757 Accession number: AF152331 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protocadherin gamma-B2; PCDH-gamma-B2; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
22 .. 22 T/A rs185682995 + CDS Nonsynonymous[Cys8Ser]
35 .. 35 G/C rs72790010 + CDS Nonsynonymous[Arg12Pro]
77 .. 77 C/G rs17097231 + CDS Nonsynonymous[Pro26Arg]
110 .. 110 T/C rs201518165 + CDS Nonsynonymous[Ile37Thr]
172 .. 172 G/A rs13171859 + CDS Nonsynonymous[Val58Ile]
196 .. 196 C/G rs146919505 + CDS Nonsynonymous[Leu66Val]
216 .. 216 G/A rs188525608 + CDS Synonymous[Lys72Lys]
235 .. 235 C/A rs115198789 + CDS Nonsynonymous[Pro79Thr]
319 .. 319 G/A rs150944400 + CDS Nonsynonymous[Asp107Asn]
358 .. 358 G/A rs62621827 + CDS Nonsynonymous[Ala120Thr]
430 .. 430 G/A rs180935383 + CDS Nonsynonymous[Glu144Lys]
531 .. 531 C/T rs79500662 + CDS Synonymous[Tyr177Tyr]
743 .. 743 G/C rs116335001 + CDS Nonsynonymous[Arg248Thr]
878 .. 878 A/G rs185853995 + CDS Nonsynonymous[Asn293Ser]
1025 .. 1025 A/T rs150123769 + CDS Nonsynonymous[Asp342Val]
1208 .. 1208 A/G rs138881803 + CDS Nonsynonymous[Lys403Arg]
1216 .. 1216 A/T rs200180237 + CDS Nonsynonymous[Thr406Ser]
1248 .. 1248 A/G rs74488479 + CDS Synonymous[Pro416Pro]
1374 .. 1374 G/T rs142115917 + CDS Nonsynonymous[Met458Ile]
1419 .. 1419 A/G rs199916536 + CDS Synonymous[Gln473Gln]
1543 .. 1543 T/C rs192424877 + CDS Nonsynonymous[Phe515Leu]
1602 .. 1602 C/T rs10062250 + CDS Synonymous[Ala534Ala]
1603 .. 1603 C/A rs1860251 + CDS Nonsynonymous[Arg535Ser]
1605 .. 1605 C/G rs1860252 + CDS Synonymous[Arg535Arg]
1617 .. 1617 G/C rs1860253 + CDS Synonymous[Ser539Ser]
1646 .. 1646 G/A rs202187251 + CDS Nonsynonymous[Arg549His]
1653 .. 1653 A/G rs1860254 + CDS Synonymous[Leu551Leu]
1705 .. 1705 C/A rs138456654 + CDS Nonsynonymous[Pro569Thr]
1753 .. 1753 G/A rs201231976 + CDS Nonsynonymous[Gly585Ser]
1814 .. 1814 C/A rs202129585 + CDS Nonsynonymous[Ser605Tyr]
1933 .. 1933 G/T rs62621761 + CDS Nonsynonymous[Ala645Ser]
1971 .. 1971 G/C rs73265834 + CDS Synonymous[Thr657Thr]
2036 .. 2036 G/C rs62378417 + CDS Nonsynonymous[Arg679Pro]
2059 .. 2059 A/G rs57735633 + CDS Nonsynonymous[Lys687Glu]
2136 .. 2136 C/A rs183808051 + CDS Synonymous[Ser712Ser]
2283 .. 2283 C/T rs187134440 + CDS Synonymous[Ala761Ala]
2385 .. 2385 C/T rs201116803 + CDS Synonymous[Ala795Ala]
2390 .. 2390 G/T rs201960802 + CDS Nonsynonymous[Gly797Val]
2417 .. 2417 T/C rs190493890 + CDS Nonsynonymous[Leu806Ser]
2458 .. 2458 G/A rs201391904 + CDS Nonsynonymous[Ala820Thr]
2470 .. 2470 G/A rs200418116 + CDS Nonsynonymous[Gly824Ser]
2526 .. 2526 T/C rs149352680 + CDS Synonymous[Phe842Phe]
2625 .. 2625 C/T rs143630962 + CDS Synonymous[Ser875Ser]
2626 .. 2626 G/A rs114669158 + CDS Nonsynonymous[Ala876Thr]
2629 .. 2629 C/T rs148119281 + CDS Nonsynonymous[Arg877Cys]
2634 .. 2634 C/T rs141873183 + CDS Synonymous[Tyr878Tyr]
2637 .. 2637 A/G rs2233612 + CDS Synonymous[Gly879Gly]
2659 .. 2659 G/A rs116366286 + CDS Nonsynonymous[Val887Met]
2672 .. 2672 G/A rs61749029 + CDS Nonsynonymous[Arg891His]
2699 .. 2699 A/G rs201009079 + CDS Nonsynonymous[Asn900Ser]
2715 .. 2715 C/T rs143362044 + CDS Synonymous[Asn905Asn]
2758 .. 2758 G/A rs200541479 + CDS Nonsynonymous[Gly920Ser]
2774 .. 2774 C/T rs202071188 + CDS Nonsynonymous[Ser925Leu]
2793 .. 2793 G/A rs147534370 + CDS Synonymous[Lys931Lys]
2825 .. 2825 C/T rs201024828 + 3'UTR
2826 .. 2826 G/A rs2233613 + 3'UTR
2931 .. 2931 G/A rs76613492 + 3'UTR
2987 .. 2987 T/C rs115159796 + 3'UTR
2997 .. 2997 C/A rs191106767 + 3'UTR
3233 .. 3233 C/A rs146235929 + 3'UTR
3251 .. 3251 G/C rs4912608 + 3'UTR
3326 .. 3326 T/G rs148447880 + 3'UTR
3488 .. 3488 G/A rs142624814 + 3'UTR
3509 .. 3509 T/C rs113814137 + 3'UTR
3515 .. 3515 C/T rs150999050 + 3'UTR
3522 .. 3522 T/G rs187622252 + 3'UTR
3711 .. 3711 A/G rs192947391 + 3'UTR
3794 .. 3794 T/C rs140884268 + 3'UTR
3817 .. 3817 G/A rs111365449 + 3'UTR
4008 .. 4008 A/G rs78180647 + 3'UTR
4076 .. 4076 G/A rs185198109 + 3'UTR
4169 .. 4169 C/T rs147780926 + 3'UTR
4462 .. 4462 C/T rs141207714 + 3'UTR
4481 .. 4481 G/T rs189734474 + 3'UTR
4537 .. 4537 C/T rs112402554 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
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 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer