H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000056301 Accession number: BX647654 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Talin-2 family protein.
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
60 .. 60 A/C rs138114387 + 5'UTR
80 .. 80 A/G rs142266938 + 5'UTR
149 .. 149 C/A rs191546956 + 5'UTR
212 .. 212 A/G rs201691761 + 5'UTR
288 .. 288 G/A rs140439308 + 5'UTR
293 .. 293 C/T rs143190066 + 5'UTR
299 .. 299 G/A rs147516120 + 5'UTR
358 .. 358 C/G rs117175127 + 5'UTR
380 .. 380 G/A rs142980778 + 5'UTR
395 .. 395 C/T rs151024322 + 5'UTR
408 .. 408 C/T rs139690512 + 5'UTR
443 .. 443 T/C rs78491375 + 5'UTR
473 .. 473 C/T rs199908916 + 5'UTR
609 .. 609 G/A rs199835181 + 5'UTR
733 .. 733 T/C rs200880219 + 5'UTR
833 .. 833 T/A rs113302328 + 5'UTR
1055 .. 1055 G/C rs145657792 + 5'UTR
1090 .. 1090 G/C rs181568380 + 5'UTR
1099 .. 1099 T/A rs114132720 + 5'UTR
1111 .. 1111 C/T rs12904153 + 5'UTR
1174 .. 1174 C/T rs185716501 + 5'UTR
1179 .. 1179 A/C rs138195978 + 5'UTR
1181 .. 1181 A/T rs189395007 + 5'UTR
1234 .. 1234 G/T rs113508216 + 5'UTR
1292 .. 1292 C/T rs112784450 + 5'UTR
1476 .. 1476 C/G rs182280328 + 5'UTR
1569 .. 1569 G/T rs186071888 + 5'UTR
1661 .. 1661 G/A rs34550305 + 5'UTR
1824 ^ 1825 -/G rs139964467 + 5'UTR
1860 .. 1860 A/G rs117508998 + 5'UTR
2081 .. 2081 C/T rs117878324 + 5'UTR
2159 .. 2159 A/G rs190972381 + 5'UTR
2293 .. 2293 C/G rs11857656 + 5'UTR
2361 .. 2361 G/A rs183178014 + 5'UTR
2375 .. 2375 T/C rs75827446 + 5'UTR
2440 .. 2440 C/T rs8033767 + 5'UTR
2455 .. 2455 T/C rs4775538 + 5'UTR
2487 .. 2487 A/G rs201396634 + 5'UTR
2506 .. 2506 A/G rs202075569 + 5'UTR
2516 .. 2516 G/A rs140625492 + 5'UTR
2536 .. 2536 C/T rs118024777 + 5'UTR
2580 .. 2580 A/C rs139323765 + 5'UTR
2602 .. 2602 C/T rs146729597 + 5'UTR
2608 .. 2608 C/T rs148891969 + 5'UTR
2609 .. 2609 G/A rs143603462 + 5'UTR
2644 .. 2644 G/A rs148071691 + 5'UTR
2688 .. 2688 G/A rs141621869 + 5'UTR
2689 .. 2689 C/A rs74381092 + 5'UTR
2736 .. 2736 C/T rs150096125 + 5'UTR
2754 .. 2754 C/T rs190697613 + CDS Nonsynonymous[Ser6Leu]
2755 .. 2755 G/A rs138708550 + CDS Synonymous[Ser6Ser]
2771 .. 2771 G/A rs142760429 + CDS Nonsynonymous[Ala12Thr]
2774 .. 2774 C/T rs200886764 + CDS Nonsynonymous[Arg13Cys]
2785 .. 2785 C/T rs147498967 + CDS Synonymous[Ala16Ala]
2917 .. 2917 C/T rs140087396 + CDS Synonymous[Ile60Ile]
2918 .. 2918 G/A rs149627024 + CDS Nonsynonymous[Asp61Asn]
2920 .. 2920 T/C rs144384637 + CDS Synonymous[Asp61Asp]
2939 .. 2939 C/T rs202059168 + CDS Nonsynonymous[Arg68Trp]
2947 .. 2947 C/T rs148806117 + CDS Synonymous[Ile70Ile]
2988 .. 2988 C/T rs147117916 + CDS Nonsynonymous[Thr84Met]
3033 .. 3033 C/T rs142261304 + CDS Nonsynonymous[Ser99Leu]
3037 .. 3037 G/C rs35946975 + CDS Synonymous[Val100Val]
3049 .. 3049 C/T rs139582651 + CDS Synonymous[Ile104Ile]
3061 .. 3061 C/T rs201384963 + CDS Synonymous[Ile108Ile]
3070 .. 3070 C/T rs139364010 + CDS Synonymous[Ile111Ile]
3083 .. 3083 C/T rs146711240 + CDS Nonsynonymous[Arg116Trp]
3084 .. 3084 G/A rs200045232 + CDS Nonsynonymous[Arg116Gln]
3085 .. 3085 G/T rs140291112 + CDS Synonymous[Arg116Arg]
3113 .. 3113 G/A rs201711971 + CDS Nonsynonymous[Val126Met]
3154 .. 3154 C/T rs200925755 + CDS Synonymous[Ala139Ala]
3168 .. 3168 C/T rs149940780 + CDS Nonsynonymous[Ala144Val]
3226 .. 3226 C/G rs200255870 + CDS Synonymous[Leu163Leu]
3238 .. 3238 C/T rs150770826 + CDS Synonymous[Ala167Ala]
3245 .. 3245 A/T rs200011295 + CDS Nonsynonymous[Met170Leu]
3316 .. 3316 C/T rs145072613 + CDS Synonymous[Ala193Ala]
3317 .. 3317 G/A rs141816570 + CDS Nonsynonymous[Ala194Thr]
3331 .. 3331 G/A rs145732508 + CDS Synonymous[Lys198Lys]
3346 .. 3346 C/T rs113320595 + CDS Synonymous[Asp203Asp]
3358 .. 3358 G/A rs141182921 + CDS Synonymous[Thr207Thr]
3361 .. 3361 G/A rs146956888 + CDS Synonymous[Leu208Leu]
3406 .. 3406 C/T rs200962160 + CDS Synonymous[Asp223Asp]
3407 .. 3407 G/A rs138052939 + CDS Nonsynonymous[Ala224Thr]
3416 .. 3416 G/A rs200375758 + CDS Nonsynonymous[Glu227Lys]
3456 ^ 3457 -/A rs36019073 + CDS
3463 .. 3463 A/T rs141936748 + CDS Synonymous[Gly242Gly]
3467 .. 3467 T/A rs150674208 + CDS Nonsynonymous[Phe244Ile]
3470 .. 3470 G/T rs138929602 + CDS Nonsynonymous[Val245Phe]
3477 .. 3477 A/G rs149434344 + CDS Nonsynonymous[Tyr247Cys]
3515 .. 3515 G/A rs141920011 + CDS Nonsynonymous[Val260Met]
3522 .. 3522 C/T rs146289948 + CDS Nonsynonymous[Ala262Val]
3545 .. 3545 G/A rs7182971 + CDS Nonsynonymous[Val270Ile]
3550 .. 3550 T/A rs144235392 + CDS Synonymous[Thr271Thr]
3589 .. 3589 C/A rs145593887 + CDS Synonymous[Thr284Thr]
3631 .. 3631 A/G rs148751789 + CDS Synonymous[Ala298Ala]
3668 .. 3668 C/T rs202223044 + CDS Nonsynonymous[Arg311Cys]
3673 .. 3673 T/C rs111682039 + CDS Synonymous[Thr312Thr]
3684 .. 3684 A/G rs200813507 + CDS Nonsynonymous[Asp316Gly]
3697 .. 3697 C/T rs199706459 + CDS Synonymous[Gly320Gly]
3732 .. 3732 A/G rs201901108 + CDS Nonsynonymous[Gln332Arg]
3739 .. 3739 C/T rs150988681 + CDS Synonymous[Cys334Cys]
3781 .. 3781 C/T rs201695596 + CDS Synonymous[Ala348Ala]
3792 .. 3792 C/T rs140861754 + CDS Nonsynonymous[Thr352Met]
3898 .. 3898 C/T rs144521176 + CDS Synonymous[Asp387Asp]
3921 .. 3921 C/T rs199628532 + CDS Nonsynonymous[Ala395Val]
3955 .. 3955 C/T rs201437859 + CDS Synonymous[Phe406Phe]
3963 .. 3963 A/G rs147862885 + CDS Nonsynonymous[His409Arg]
3984 .. 3984 C/T rs141116043 + CDS Nonsynonymous[Thr416Met]
4004 .. 4004 G/C rs202071126 + CDS Nonsynonymous[Asp423His]
4021 .. 4021 G/A rs147453485 + CDS Synonymous[Val428Val]
4022 .. 4022 T/G rs146939622 + CDS Nonsynonymous[Ser429Ala]
4059 .. 4059 C/T rs137970385 + CDS Nonsynonymous[Ala441Val]
4066 .. 4066 G/A rs149064940 + CDS Synonymous[Gln443Gln]
4091 .. 4091 C/A rs143323545 + CDS Nonsynonymous[Leu452Ile]
4093 .. 4093 C/T rs148352544 + CDS Synonymous[Leu452Leu]
4169 .. 4169 A/G rs142197635 + CDS Nonsynonymous[Ile478Val]
4210 .. 4210 T/C rs146392476 + CDS Synonymous[Ala491Ala]
4231 .. 4231 G/A rs1463802 - CDS Synonymous[Lys498Lys]
4270 .. 4270 T/C rs75499542 + CDS Synonymous[Ala511Ala]
4300 .. 4300 G/T rs199830852 + CDS Synonymous[Ser521Ser]
4306 .. 4306 C/T rs146067134 + CDS Synonymous[Leu523Leu]
4325 .. 4325 G/C rs35997243 + CDS Nonsynonymous[Glu530Gln]
4347 .. 4347 C/G/T rs11633796 + CDS
4381 .. 4381 G/A rs143127416 + CDS Synonymous[Lys548Lys]
4387 .. 4387 G/A rs189930439 + CDS Synonymous[Glu550Glu]
4404 .. 4404 C/T rs139180466 + CDS Nonsynonymous[Ser556Leu]
4412 .. 4412 G/A rs201426004 + CDS Nonsynonymous[Val559Ile]
4426 .. 4426 A/G rs35165676 + CDS Synonymous[Thr563Thr]
4448 .. 4448 A/C rs189659936 + CDS Synonymous[Arg571Arg]
4483 .. 4483 A/G rs111685676 + CDS Synonymous[Lys582Lys]
4487 .. 4487 G/A rs147845841 + CDS Nonsynonymous[Val584Met]
4527 .. 4527 C/T rs139795410 + CDS Nonsynonymous[Ala597Val]
4545 .. 4545 G/A rs144998736 + CDS Nonsynonymous[Arg603Gln]
4553 .. 4553 G/A rs150935340 + CDS Nonsynonymous[Val606Met]
4570 .. 4570 G/A rs140753187 + CDS Synonymous[Thr611Thr]
4573 .. 4573 T/C rs200642903 + CDS Synonymous[Ala612Ala]
4595 .. 4595 C/A rs145263280 + CDS Nonsynonymous[Pro620Thr]
4597 .. 4597 C/G rs199721625 + CDS Synonymous[Pro620Pro]
4609 .. 4609 C/T rs150114385 + CDS Synonymous[Asp624Asp]
4632 .. 4632 G/A rs75413920 + CDS Nonsynonymous[Arg632His]
4678 .. 4678 C/T rs140658126 + CDS Synonymous[His647His]
4712 .. 4712 T/C rs3816988 - CDS Nonsynonymous[Phe659Leu]
4751 .. 4751 G/A rs138463845 + CDS Nonsynonymous[Gly672Ser]
4753 .. 4753 C/T rs143080480 + CDS Synonymous[Gly672Gly]
4754 .. 4754 G/A rs143218219 + CDS Nonsynonymous[Ala673Thr]
4759 .. 4759 G/T rs146565364 + CDS Synonymous[Val674Val]
4779 .. 4779 C/T rs200020059 + CDS Nonsynonymous[Ala681Val]
4781 .. 4781 G/A rs201569811 + CDS Nonsynonymous[Glu682Lys]
4805 .. 4805 G/A rs200187638 + CDS Nonsynonymous[Val690Met]
4867 .. 4867 C/T rs141440566 + CDS Synonymous[Ile710Ile]
4911 .. 4911 A/C rs202139120 + CDS Nonsynonymous[Lys725Thr]
4991 .. 4991 G/A rs62004656 + CDS Nonsynonymous[Ala752Thr]
5004 .. 5004 C/T rs139325348 + CDS Nonsynonymous[Ser756Leu]
5020 .. 5020 G/A rs142793310 + CDS Synonymous[Gln761Gln]
5074 .. 5074 C/T rs139730009 + CDS Synonymous[Asp779Asp]
5083 .. 5083 G/A rs201024580 + CDS Synonymous[Gln782Gln]
5092 .. 5092 G/A rs8038919 + CDS Synonymous[Gln785Gln]
5105 .. 5105 G/A rs144866965 + CDS Nonsynonymous[Ala790Thr]
5122 .. 5122 G/C rs74020685 + CDS Synonymous[Ala795Ala]
5149 .. 5149 G/A rs148610300 + CDS Synonymous[Ala804Ala]
5161 .. 5161 C/T rs2242380 + CDS Synonymous[Ser808Ser]
5165 .. 5165 C/G rs140723056 + CDS Nonsynonymous[Gln810Glu]
5179 .. 5179 C/T rs142081839 + CDS Synonymous[Ser814Ser]
5212 .. 5212 C/T rs202049914 + CDS Synonymous[Val825Val]
5224 .. 5224 G/A rs199741636 + CDS Synonymous[Thr829Thr]
5249 .. 5249 G/T rs78592652 + CDS Nonsynonymous[Val838Leu]
5275 .. 5275 C/T rs200114667 + CDS Synonymous[Ala846Ala]
5327 .. 5327 C/T rs140301741 + CDS Nonsynonymous[Leu864Phe]
5334 .. 5334 G/A rs145762497 + CDS Nonsynonymous[Arg866His]
5353 .. 5353 A/T rs937418 + CDS Synonymous[Ala872Ala]
5371 .. 5371 C/T rs141378215 + CDS Synonymous[Asp878Asp]
5375 .. 5375 G/A rs150270416 + CDS Nonsynonymous[Asp880Asn]
5377 .. 5377 T/C rs201254105 + CDS Synonymous[Asp880Asp]
5401 .. 5401 G/T rs200809264 + CDS Synonymous[Val888Val]
5423 .. 5423 G/A rs199823044 + CDS Nonsynonymous[Ala896Thr]
5437 .. 5437 A/C rs34464964 + CDS Nonsynonymous[Glu900Asp]
5451 .. 5451 A/G rs117761903 + CDS Nonsynonymous[Glu905Gly]
5541 .. 5541 G/A rs138975281 + CDS Nonsynonymous[Gly935Asp]
5571 .. 5571 C/T rs57314391 + 3'UTR
5616 .. 5616 G/T rs150702642 + 3'UTR
5628 .. 5628 G/T rs11633471 + 3'UTR
5647 .. 5647 C/T rs74978059 + 3'UTR
5675 .. 5675 G/A rs182966207 + 3'UTR
5698 .. 5698 G/A rs112547592 + 3'UTR
5738 .. 5738 T/C rs16945912 + 3'UTR
5748 .. 5748 A/C rs138940972 + 3'UTR
5782 .. 5782 A/G rs62007063 + 3'UTR
5802 .. 5802 G/T rs142174915 + 3'UTR
5816 .. 5816 C/T rs146359581 + 3'UTR
5865 .. 5865 G/A rs16945915 + 3'UTR
5887 .. 5887 G/A rs12914026 + 3'UTR
5938 .. 5938 A/C rs62007064 + 3'UTR
5939 .. 5939 C/T rs188849664 + 3'UTR
5974 .. 5974 C/T rs191594900 + 3'UTR
6021 .. 6021 C/T rs183496810 + 3'UTR
6082 .. 6082 A/G rs187968319 + 3'UTR
6084 .. 6084 G/A rs192439495 + 3'UTR
6099 .. 6099 C/T rs139659910 + 3'UTR
6101 .. 6101 C/T rs143291156 + 3'UTR
6113 .. 6113 C/A rs144475089 + 3'UTR
6170 .. 6170 G/C rs79165205 + 3'UTR
6189 .. 6189 G/A rs60132086 + 3'UTR
6238 .. 6238 C/T rs148413867 + 3'UTR
6272 .. 6272 G/A rs117391291 + 3'UTR
6362 .. 6362 C/T rs151018235 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
L2c 1144 1339 -
MER33 1783 2060 +
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene;  Repeat mask viewerRepeat Mask Viewer