H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000052733 Accession number: BC042650 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Protocadherin gamma-C4; PCDH-gamma-C4; Precursor;
 
 

Motif information
ORF

length(604),orf(93:1907)
MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTFVGNVAQ
DFLLDTDSLSARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSA
SCIVPLEFVTEGPLEMYRAEVEIVDVNDHAPRFPRQQLDLEIGEAAPPGQ
RFPLEKAQDADVGSNSISSYRLSSNEHFALDVKKRSDGSLVPELLLEKPL
DREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRIS
VLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTG
KLTLLGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYI
TVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSA
FRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPPLSTHRTIFLNISDVND
NPPSFFQRSHEVFVPENNRPGDLLCSLAASPECLHPRQQCHTDQRSWQAG
WQGPSRWQWQQEEVGQEGEEVTWRPGQEPQGSLSPTSPASPYLHPGLRVS
GLTPRILVGAKAMLPLGNRNKCPVSTYPFPPRGLNMQKQFRWEPPSNQLL
YPWG*
a.a.
length
InterPro Name
length(83), motif(29:111) 83 IPR013164 Cadherin, N-terminal [Domain]
length(67), motif(30:96) 67 IPR015919 Cadherin-like [Domain]
length(83), motif(31:113) 83 IPR002126 Cadherin [Domain]
length(99), motif(35:133) 99 IPR002126 Cadherin [Domain]
length(81), motif(51:131) 81 IPR002126 Cadherin [Domain]
length(20), motif(73:92) 20 IPR002126 Cadherin [Domain]
length(11), motif(121:131) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(115), motif(125:239) 115 IPR002126 Cadherin [Domain]
length(108), motif(127:234) 108 IPR015919 Cadherin-like [Domain]
length(30), motif(133:162) 30 IPR002126 Cadherin [Domain]
length(109), motif(134:242) 109 IPR002126 Cadherin [Domain]
length(93), motif(141:233) 93 IPR002126 Cadherin [Domain]
length(86), motif(155:240) 86 IPR002126 Cadherin [Domain]
length(13), motif(207:219) 13 IPR002126 Cadherin [Domain]
length(20), motif(221:240) 20 IPR002126 Cadherin [Domain]
length(11), motif(230:240) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(125), motif(230:354) 125 IPR015919 Cadherin-like [Domain]
length(14), motif(240:253) 14 IPR002126 Cadherin [Domain]
length(107), motif(240:346) 107 IPR002126 Cadherin [Domain]
length(108), motif(243:350) 108 IPR002126 Cadherin [Domain]
length(94), motif(247:340) 94 IPR002126 Cadherin [Domain]
length(85), motif(264:348) 85 IPR002126 Cadherin [Domain]
length(27), motif(298:324) 27 IPR002126 Cadherin [Domain]
length(18), motif(332:349) 18 IPR002126 Cadherin [Domain]
length(11), motif(338:348) 11 IPR020894 Cadherin conserved site [Conserved_site]
length(134), motif(338:471) 134 IPR015919 Cadherin-like [Domain]
length(110), motif(347:456) 110 IPR002126 Cadherin [Domain]
length(105), motif(351:455) 105 IPR002126 Cadherin [Domain]
length(84), motif(358:441) 84 IPR002126 Cadherin [Domain]
length(82), motif(372:453) 82 IPR002126 Cadherin [Domain]
length(11), motif(443:453) 11 IPR020894 Cadherin conserved site [Conserved_site]