H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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H-Invitational ID: HIT000051469 Accession number: BC035680 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: T-cell receptor alpha chain C region;

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Transcript original information Accession number BC035680.1 CAGE tag ID NA EST ID NA Clone Number IMAGE:5748161 Experimental resources   NBRC ; HGPD ; Antibody (TRAJ17) ; Catalog (TRAJ17); Sequence data provider Provider:MGC/NCI;  Annotation project H-Invitational FLcDNA Length of cDNA 1590[bp] (No. of exon:7)[A:405 T:397 G:362 C:426] Devision HUM Molecular type mRNA Library origin Cell type NA Tissue type Pancreas, Spleen, adult pooled Develpmental stage NA

Sequence quality information CDS feature Complete CDS Kozak sequence NA PolyA Site: 1555(+) Signal: 1534-1538(+) Vector/adapter sequence NA Frame shift NA Remaining intron NA Splice site acceptor (NAGNAG) NA Transcript quality feature NA Notes NA

CCGGTGTCGGGAAGCACCAGTGCCCTGAGGAAGGGCCATTTCCAAAAGCC CTGTGCTGACACAGGGTTGCTGGTTCCTCTTCAAGAGCCCACTCTCTGGG GTGGGGCCATATCTCCAGCAGAGGTGGGCTGGAAAGGACCCCCCCAATCC CGCCCGCCGTGAGCTTAGCTGGAGCCATGGCCTCTGCACCCATCTCGATG CTTGCGATGCTCTTCACATTGAGTGGGCTGAGAGCTCAGTCAGTGGCTCA GCCGGAAGATCAGGTCAACGTTGCTGAAGGGAATCCTCTGACTGTGAAAT GCACCTATTCAGTCTCTGGAAACCCTTATCTTTTTTGGTATGTTCAATAC CCCAACCGAGGCCTCCAGTTCCTTCTGAAATACATCACAGGGGATAACCT GGTTAAAGGCAGCTATGGCTTTGAAGCTGAATTTAACAAGAGCCAAACCT CCTTCCACCTGAAGAAACCATCTGCCCTTGTGAGCGACTCCGCTTTGTAC TTCTGTGCTGTGAGAGACGCCAAAGCTGCAGGCAACAAGCTAACTTTTGG AGGAGGAACCAGGGTGCTAGTTAAACCAAATATCCAGAACCCTGACCCTG CCGTGTACCAGCTGAGAGACTCTAAATCCAGTGACAAGTCTGTCTGCCTA TTCACCGATTTTGATTCTCAAACAAATGTGTCACAAAGTAAGGATTCTGA TGTGTATATCACAGACAAAACTGTGCTAGACATGAGGTCTATGGACTTCA AGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATGTGCA AACGCCTTCAACAACAGCATTATTCCAGAAGACACCTTCTTCCCCAGCCC AGAAAGTTCCTGTGATGTCAAGCTGGTCGAGAAAAGCTTTGAAACAGATA CGAACCTAAACTTTCAAAACCTGTCAGTGATTGGGTTCCGAATCCTCCTC CTGAAAGTGGCCGGGTTTAATCTGCTCATGACGCTGCGGCTGTGGTCCAG CTGAGATCTGCAAGATTGTAAGACAGCCTGTGCTCCCTCGCTCCTTCCTC TGCATTGCCCCTCTTCTCCCTCTCCAAACAGAGGGAACTCTCCTACCCCC AAGGAGGTGAAAGCTGCTACCACCTCTGTGCCCCCCCGGCAATGCCACCA ACTGGATCCTACCCGAATTTATGATTAAGATTGCTGAAGAGCTGCCAAAC ACTGCTGCCACCCCCTCTGTTCCCTTATTGCTGCTTGTCACTGCCTGACA TTCACGGCAGAGGCAAGGCTGCTGCAGCCTCCCCTGGCTGTGCACATTCC CTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAGATGATGGATCTTC AGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTGTGAGGGGTTTAT TTTTTTTTAATAGTGTTCATAAAGAAATACATAGTATTCTTCTTCTCAAG ACGTGGGGGGAAATTATCTCATTATCGAGGCCCTGCTATGCTGTGTATCT GGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAA GAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA