H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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Locus view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS

H-Invitational ID: HIT000051469 Accession number: BC035680 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: T-cell receptor alpha chain C region;

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Single Nucleotide Polymorphism (SNP) and indel  Location Variation dbSNP ID Strand CDS/UTR Translation 130 .. 130 T/C rs35505570 + 5'UTR 135 .. 135 A/C rs61974828 + 5'UTR 147 .. 147 A/G rs926027 + 5'UTR 148 .. 148 T/C rs117249186 + 5'UTR 269 .. 269 C/G rs113553257 + CDS Nonsynonymous[Asn31Lys] 590 .. 590 C/G rs56298757 + CDS Nonsynonymous[Asn138Lys] 799 .. 799 C/G rs111376523 + CDS Nonsynonymous[Ala208Gly] 804 .. 804 G/A rs61740301 + CDS Nonsynonymous[Ala210Thr] 829 .. 829 A/C rs61741618 + CDS Nonsynonymous[Glu218Ala] 830 .. 830 A/G rs1263644 + CDS Synonymous[Glu218Glu] 902 .. 902 G/T rs78619778 + CDS Synonymous[Thr242Thr] 1011 .. 1011 C/A rs74707616 + 3'UTR 1087 .. 1087 A/G rs45512705 + 3'UTR 1094 .. 1094 T/C rs15795 + 3'UTR 1127 .. 1127 T/C rs112310271 + 3'UTR 1146 ^ 1147 -/C rs11462449 + 3'UTR 1147 ^ 1148 -/C rs35249538 + 3'UTR 1163 .. 1163 C/A rs17461 + 3'UTR 1279 ^ 1280 -/C rs33917135 + 3'UTR 1280 ^ 1281 -/C rs34860651 + 3'UTR 1283 .. 1283 C/G rs3699 + 3'UTR 1377 .. 1377 T/C rs3700 + 3'UTR 1378 .. 1378 G/A rs79317848 + 3'UTR 1379 .. 1379 C/G rs3701 + 3'UTR 1428 .. 1428 T/A/C/G rs3702 + 3'UTR 1455 .. 1455 G/C rs116430416 + 3'UTR 1497 .. 1497 A/G rs9125 + 3'UTR  Microsatellite (Short Tandem Repeat, STR) No data available  Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD) No data available

Repeat  No data available Database links Human-Gene diversity Of Life-style related Diseases(H-GOLD);  Related H-InvDB links VaryGene;  Repeat Mask Viewer;