H-InvDB_8.3 released on March 26, 2013.
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H-Inv ID (HIT)
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H-Invitational ID:
HIT000051430
Accession number:
BC035592
Created date:
26-Mar-2013
Last modified:
20-Apr-2012
Definition:
Similar to T-cell gamma protein; Fragment;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
54 .. 54
A/T
rs59759932
-
5'UTR
80 .. 80
G/A
rs2020448
-
5'UTR
120 .. 120
G/T
rs2012300
+
5'UTR
148 .. 148
C/T
rs28527371
-
5'UTR
200 .. 200
C/A
rs57696777
-
CDS
Nonsynonymous[Ala4Asp]
485 .. 485
T/G
rs112420338
-
CDS
Nonsynonymous[Ile99Arg]
589 .. 589
G/C
rs113354949
-
CDS
Nonsynonymous[Val134Leu]
604 .. 604
T/A
rs76205258
-
CDS
Nonsynonymous[Ser139Thr]
610 .. 610
G/A
rs1810378
+
CDS
Nonsynonymous[Asp141Asn]
648 .. 648
C/A
rs62445008
-
CDS
Nonsynonymous[Phe153Leu]
722 .. 722
T/C
rs13227725
-
CDS
Nonsynonymous[Leu178Pro]
726 .. 726
T/C
rs13227721
-
CDS
Synonymous[His179His]
780 .. 780
A/G
rs61746222
-
CDS
Synonymous[Pro197Pro]
789 .. 789
C/G
rs62445007
-
CDS
Nonsynonymous[Ser200Arg]
792 .. 792
G/A
rs17853440
-
CDS
Synonymous[Gln201Gln]
814 .. 814
A/G
rs113129415
-
CDS
Nonsynonymous[Arg209Gly]
822 .. 822
T/C
rs77157249
-
CDS
Synonymous[Asn211Asn]
889 .. 889
T/C
rs12532845
-
3'UTR
913 .. 913
G/C
rs12532792
-
3'UTR
926 .. 926
A/G
rs12535491
-
3'UTR
936 .. 936
A/G
rs12535490
-
3'UTR
944 .. 944
C/T
rs12532842
-
3'UTR
1118 .. 1118
C/T
rs12532780
-
3'UTR
1153 .. 1153
C/T
rs2736949
+
3'UTR
1165 .. 1165
A/G
rs55684209
+
3'UTR
1166 .. 1166
G/A
rs76591336
-
3'UTR
1188 .. 1188
T/G
rs111405005
-
3'UTR
1204 .. 1204
A/C
rs61736347
-
3'UTR
1230 .. 1230
G/A
rs76686099
-
3'UTR
1263 .. 1263
T/G
rs111864800
-
3'UTR
1292 .. 1292
T/C
rs2534585
-
3'UTR
1357 .. 1357
G/A
rs116386233
-
3'UTR
1365 .. 1365
T/C
rs2534584
-
3'UTR
1426 .. 1426
G/C
rs11762988
-
3'UTR
1441 .. 1441
G/A
rs74768635
-
3'UTR
1449 .. 1449
T/A
rs58573370
-
3'UTR
1478 .. 1478
A/G
rs58567878
-
3'UTR
1485 .. 1485
T/G
rs116493387
-
3'UTR
1510 .. 1510
G/C
rs112877032
-
3'UTR
1577 .. 1577
G/C
rs114473135
-
3'UTR
1604 .. 1604
T/-/C
rs2534583
-
3'UTR
1604 .. 1604
T/C
rs116788676
-
3'UTR
1623 .. 1623
T/G
rs2534582
-
3'UTR
1624 .. 1624
C/G/GG/TC
rs2534581
-
3'UTR
1647 ^ 1648
-/TC
rs75036760
-
3'UTR
1658 .. 1658
T/C
rs111537562
-
3'UTR
1659 .. 1659
T/C
rs78287128
-
3'UTR
1792 .. 1792
T/C
rs66478351
-
3'UTR
1795 .. 1795
T/G
rs117354290
-
3'UTR
1858 .. 1858
A/T
rs116303965
-
3'UTR
1863 .. 1863
T/C
rs117090244
-
3'UTR
1891 .. 1891
T/C
rs118119177
-
3'UTR
1907 .. 1907
C/T
rs10232528
-
3'UTR
1959 .. 1959
G/A
rs58232536
-
3'UTR
2131 .. 2131
T/A
rs2735140
+
3'UTR
2169 .. 2169
C/T
rs2534580
-
3'UTR
2183 .. 2183
T/C
rs2735141
+
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
No data available
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;