H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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H-Invitational ID: HIT000040509 Accession number: BC028242 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Similar to Programmed cell death protein 6.

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Gene function information

H-Inv ID		HIT000040509
H-Inv cluster ID		HIX0004700
Accession number		BC028242.1
CAGE tag ID		NA
EST ID		NA
Transcript feature		NO;  Splicing isoform
Coding potential		Protein coding;
Definition		Similar to Programmed cell death protein 6.
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (NP_037364)  [Identity/coverage = 97.561%/65.45%] to Homo sapiens protein.
Experimental evidence		Protein evidence
PubMed ID		NA
Gene family/group	H-Inv gene family/group ID	HIF0000084
	Gene family/group name	Putative EF-Hand type (IPR011992).
	Evidence motif (InterPro) ID	IPR011992
Gene symbol/name	HGNC symbol	PDCD6
	HGNC aliases	NA
	HGNC name	programmed cell death 6
	DDBJ	NA
	UniProt	NA
EC number		NA
GGDB (GlycoGene Database)	Gene symbol	NA
	Familly	NA
	Designation	NA
	Expression	NA
KEGG metabolic pathway		NA
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000118947
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NM_013232;  NM_020731;  NM_001242412;
	Ensembl	ENST00000264933;  ENST00000316418;  ENST00000502359;  ENST00000504625;  ENST00000505113;  ENST00000505221;  ENST00000505526;  ENST00000505717;  ENST00000506456;  ENST00000506909;  ENST00000507048;  ENST00000507473;  ENST00000507528;  ENST00000509581;  ENST00000510400;  ENST00000510910;  ENST00000511482;  ENST00000511487;  ENST00000512466;  ENST00000512529;  ENST00000513582;  ENST00000514523;  ENST00000515206;  ENST00000515587;
	Entrez Gene	Entrez Gene ID:10016;
	KEGG GENES	KEGG GENES(10016);
	GeneCard	PDCD6;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Curation status		Auto-annotated
Notes		NA
Related H-InvDB links		Putative EF-Hand type (IPR011992). Similarity Search Tool;  TACT;

fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.

NA