H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

Home Quick guide Navi BLAST Site map Download Contact us Help

Locus view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS

H-Invitational ID: HIT000040509 Accession number: BC028242 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Similar to Programmed cell death protein 6.

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Transcript annotation summary

H-Inv ID		HIT000040509
H-Inv cluster ID		HIX0004700
Accession number		BC028242.1
CAGE tag ID		NA
EST ID		NA
Genomic location	Chromosome	5
	Location	5p15.33
	Position	271755- 315084
	Strand	+
Transcript feature		NO;  Splicing isoform
Coding potential		Protein coding;
Definition		Similar to Programmed cell death protein 6.
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (NP_037364)  [Identity/coverage = 97.561%/65.45%] to Homo sapiens protein.
Gene family / group		Putative EF-Hand type (IPR011992).
Gene symbol/name	HGNC symbol	PDCD6
	HGNC aliases	NA
	HGNC name	programmed cell death 6
	DDBJ	NA
	UniProt	NA
EC number		NA
KEGG metabolic pathway		NA
PubMed ID		NA
Related H-InvDB links		Similarity Search Tool
Database links	RefSeq	NM_013232;  NM_020731;  NM_001242412;
	Ensembl	ENST00000264933;  ENST00000316418;  ENST00000502359;  ENST00000504625;  ENST00000505113;  ENST00000505221;  ENST00000505526;  ENST00000505717;  ENST00000506456;  ENST00000506909;  ENST00000507048;  ENST00000507473;  ENST00000507528;  ENST00000509581;  ENST00000510400;  ENST00000510910;  ENST00000511482;  ENST00000511487;  ENST00000512466;  ENST00000512529;  ENST00000513582;  ENST00000514523;  ENST00000515206;  ENST00000515587;
	Entrez Gene	Entrez Gene ID:10016;
	KEGG GENES	KEGG GENES(10016);
	GeneCard	PDCD6;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Curation status		Auto-annotated
Notes		NA