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H-Invitational ID: HIT000034397 Accession number: BC009483 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Interferon regulatory factor 1; IRF-1;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
22 .. 22 G/C rs11242115 + 5'UTR
113 .. 113 T/C rs10900809 + 5'UTR
125 .. 125 C/T rs960757 + 5'UTR
128 .. 128 C/T rs111285485 - 5'UTR
172 .. 172 G/A rs17848393 + 5'UTR
225 .. 225 A/T rs121912469 + CDS Nonsynonymous[Met8Leu]
233 .. 233 C/G rs201470560 - CDS Synonymous[Pro10Pro]
234 .. 234 T/C rs121912470 + CDS Nonsynonymous[Trp11Arg]
259 .. 259 A/G rs200434461 - CDS Nonsynonymous[Asn19Ser]
305 .. 305 C/T rs117282832 - CDS Synonymous[Phe34Phe]
402 .. 402 G/C rs137993322 - CDS Nonsynonymous[Ala67Pro]
476 .. 476 C/T rs199589588 - CDS Synonymous[Ile91Ile]
522 .. 522 C/T rs146963938 - CDS AA-STOP[Arg107*]
527 .. 527 G/A rs149276593 - CDS Synonymous[Val108Val]
548 .. 548 C/G rs17622685 - CDS Synonymous[Leu115Leu]
605 .. 605 G/A rs200378665 - CDS Synonymous[Lys134Lys]
656 .. 656 A/T rs185307675 - CDS Synonymous[Gly151Gly]
695 .. 695 C/T rs138606864 - CDS Synonymous[Tyr164Tyr]
710 .. 710 C/T rs201815197 - CDS Synonymous[Tyr169Tyr]
727 .. 727 T/C rs150089120 - CDS Nonsynonymous[Val175Ala]
758 .. 758 A/G rs9282762 + CDS Synonymous[Pro185Pro]
782 .. 782 C/T rs17848410 + CDS Synonymous[Pro193Pro]
811 .. 811 C/T rs146891501 - CDS Nonsynonymous[Pro203Leu]
862 .. 862 C/T rs145101897 - CDS Nonsynonymous[Thr220Ile]
875 .. 875 A/C rs141364775 - CDS Synonymous[Thr224Thr]
935 .. 935 G/A rs201186445 - CDS Synonymous[Ser244Ser]
954 .. 954 G/A rs201857248 - CDS Nonsynonymous[Val251Met]
968 .. 968 G/A rs199626190 - CDS Synonymous[Gly255Gly]
979 .. 979 A/G rs200736826 - CDS Nonsynonymous[Asn259Ser]
1019 .. 1019 T/C rs146613421 - CDS Synonymous[Phe272Phe]
1055 .. 1055 G/C rs113976540 - CDS Synonymous[Gly284Gly]
1133 .. 1133 G/A rs142853835 - CDS Synonymous[Leu310Leu]
1146 .. 1146 T/C rs55746618 - CDS Synonymous[Leu315Leu]
1218 .. 1218 C/G rs56288038 - 3'UTR
1323 .. 1323 C/T rs17848427 + 3'UTR
1332 .. 1332 T/C rs190321767 - 3'UTR
1562 .. 1562 C/T rs17848428 + 3'UTR
1609 .. 1609 G/A rs34850771 + 3'UTR
1625 .. 1625 C/A/T rs17848429 + 3'UTR
1627 .. 1627 C/G rs35642338 + 3'UTR
1690 .. 1690 T/C rs17848431 + 3'UTR
1693 .. 1693 G/A rs35178118 + 3'UTR
1698 .. 1698 G/A rs839 + 3'UTR
1834 .. 1834 C/A rs17848433 + 3'UTR
1876 .. 1876 C/T rs17848434 + 3'UTR
1922 .. 1922 G/C rs145347120 - 3'UTR
2009 .. 2009 A/G rs115945411 - 3'UTR
2019 .. 2019 G/T rs139911206 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer