H-InvDB x AHG DB
Transcript view
H-InvDB_8.3 released on March 26, 2013.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Invitational ID: HIT000034397 Accession number: BC009483 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Interferon regulatory factor 1.
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
22 .. 22 G/C rs11242115 + 5'UTR
113 .. 113 T/C rs10900809 + 5'UTR
125 .. 125 C/T rs960757 + 5'UTR
128 .. 128 C/T rs111285485 - 5'UTR
172 .. 172 G/A rs17848393 + 5'UTR
305 .. 305 C/T rs117282832 - CDS Synonymous[Phe34Phe]
548 .. 548 C/G rs17622685 - CDS Synonymous[Leu115Leu]
758 .. 758 A/G rs9282762 + CDS Synonymous[Pro185Pro]
782 .. 782 C/T rs17848410 + CDS Synonymous[Pro193Pro]
1055 .. 1055 G/C rs113976540 - CDS Synonymous[Gly284Gly]
1146 .. 1146 T/C rs55746618 - CDS Synonymous[Leu315Leu]
1218 .. 1218 C/G rs56288038 - 3'UTR
1323 .. 1323 C/T rs17848427 + 3'UTR
1562 .. 1562 C/T rs17848428 + 3'UTR
1609 .. 1609 G/A rs34850771 + 3'UTR
1625 .. 1625 C/T rs17848429 + 3'UTR
1627 .. 1627 C/G rs35642338 + 3'UTR
1690 .. 1690 T/C rs17848431 + 3'UTR
1693 .. 1693 G/A rs35178118 + 3'UTR
1698 .. 1698 G/A rs839 + 3'UTR
1834 .. 1834 C/A rs17848433 + 3'UTR
1876 .. 1876 C/T rs17848434 + 3'UTR
1994 .. 1994 A/- rs11347983 - 3'UTR
2009 .. 2009 A/G rs115945411 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer