H-InvDB x AHG DB
Transcript view
H-InvDB_9.0 released on May 27, 2015.
Search by for Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
H-Invitational ID: HIT000026389 Accession number: AL390147 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
35 ^ 36 -/G rs199957738 + 5'UTR
238 .. 238 T/C rs146920577 + 5'UTR
254 .. 254 A/C rs138017154 + 5'UTR
318 .. 318 C/T rs143943580 + 5'UTR
334 .. 334 T/G rs148671562 + 5'UTR
542 .. 542 A/G rs141256626 + CDS Synonymous[Thr64Thr]
563 .. 563 C/T rs11546478 + CDS Synonymous[Phe71Phe]
572 .. 572 C/T rs150808056 + CDS Synonymous[Tyr74Tyr]
749 .. 749 C/T rs137978439 + CDS Synonymous[Tyr133Tyr]
782 .. 782 C/T rs149513190 + CDS Synonymous[His144His]
875 .. 875 T/A rs144007479 + CDS Synonymous[Pro175Pro]
885 .. 885 T/A rs148276213 + CDS Nonsynonymous[Ser179Thr]
893 .. 893 C/T rs141884969 + CDS Synonymous[His181His]
962 .. 962 C/T rs141959001 + CDS Synonymous[Tyr204Tyr]
1007 .. 1007 C/T rs144664066 + CDS Synonymous[Phe219Phe]
1073 .. 1073 G/A rs140970872 + CDS Synonymous[Thr241Thr]
1121 .. 1121 C/T rs139144760 + CDS Synonymous[His257His]
1235 .. 1235 C/G rs140924363 + CDS Synonymous[Ala295Ala]
1309 .. 1309 G/A rs150231592 + CDS Nonsynonymous[Arg320His]
1316 .. 1316 T/G rs36170987 + CDS Synonymous[Val322Val]
1329 .. 1329 C/T rs62644536 + CDS Nonsynonymous[Arg327Trp]
1334 .. 1334 C/T rs11546480 + CDS Synonymous[Asp328Asp]
1338 .. 1338 G/A rs145750007 + CDS Nonsynonymous[Val330Met]
1347 .. 1347 G/A rs36139924 + CDS Nonsynonymous[Asp333Asn]
1406 .. 1406 G/A rs143027699 + CDS Synonymous[Ala352Ala]
1442 .. 1442 A/G rs36173075 + 3'UTR
1453 .. 1453 G/C rs36138803 + 3'UTR
1457 .. 1457 G/A rs141144359 + 3'UTR
1479 .. 1479 G/A rs190305972 + 3'UTR
1482 .. 1482 C/T rs11546477 + 3'UTR
1502 .. 1502 C/T rs150747032 + 3'UTR
1529 .. 1529 C/T rs139509186 + 3'UTR
1530 .. 1530 G/A rs143650974 + 3'UTR
1618 .. 1618 G/A rs147183623 + 3'UTR
1625 .. 1625 G/A rs182516015 + 3'UTR
1643 .. 1643 G/A rs140489559 + 3'UTR
1647 .. 1647 G/A rs11546481 + 3'UTR
1649 .. 1649 C/T rs185910187 + 3'UTR
1650 .. 1650 G/A rs144606574 + 3'UTR
1653 .. 1653 G/A rs148728305 + 3'UTR
1710 .. 1710 T/C rs142252355 + 3'UTR
1739 .. 1739 C/T rs191201474 + 3'UTR
1888 .. 1888 C/T rs182205590 + 3'UTR
1945 .. 1945 G/A rs151275643 + 3'UTR
1958 .. 1958 G/A rs140588788 + 3'UTR
1968 .. 1968 G/A rs144420589 + 3'UTR
1977 .. 1977 C/T rs185304057 + 3'UTR
1978 .. 1978 G/A rs11546479 + 3'UTR
1979 .. 1979 C/T rs1134015 + 3'UTR
2044 .. 2044 C/T rs150281021 + 3'UTR
2165 .. 2165 T/C rs138921693 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer