H-InvDB_9.0 released on May 27, 2015.
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H-Inv ID (HIT)
H-Inv cluster ID (HIX)
H-Inv protein ID (HIP)
H-Inv gene family/group (HIF)
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Chromosome number
Chromosome band
Definition*
Data source ID
---
CCDS ID
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FR Accession number
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GO name*
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HGNC gene name*
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H-Invitational ID:
HIT000009043
Accession number:
AK025769
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Similar to Structural maintenance of chromosomes protein 6.
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Gene function information
H-Inv ID
HIT000009043
H-Inv cluster ID
HIX0001845
Accession number
AK025769.1
CAGE tag ID
NA
EST ID
NA
Transcript feature
NO;
Coding potential
Protein coding;
Definition
Similar to Structural maintenance of chromosomes protein 6.
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
NP_001135758
) [Identity/coverage = 99.36%/57.29%] to Homo sapiens protein.
Experimental evidence
Protein evidence
PubMed ID
NA
Gene family/group
H-Inv gene family/group ID
NA
Gene family/group name
NA
Evidence motif (InterPro) ID
NA
Gene symbol/name
HGNC symbol
SMC6
HGNC aliases
"SMC6 structural maintenance of chromosomes 6-like 1 (yeast)"
HGNC name
structural maintenance of chromosomes 6
DDBJ
NA
UniProt
NA
EC number
NA
GGDB
(GlycoGene Database)
Gene symbol
NA
Familly
NA
Designation
NA
Expression
NA
KEGG metabolic pathway
NA
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000016340
No. of interaction
16
Interaction partner(s)
HIP000026480
;
HIP000028936
;
HIP000036277
;
HIP000046671
;
HIP000048308
;
HIP000060427
;
HIP000061831
;
HIP000064296
;
HIP000083689
;
HIP000087657
;
HIP000092088
;
HIP000112074
;
HIP000115112
;
HIP000116814
;
HIP000175946
;
HIP000199692
;
BIND
NA
DIP
NA
MINT
NA
HPRD
NA
IntAct
NA
Database links
RefSeq
NA
Ensembl
NA
Entrez Gene
Entrez Gene ID:79677
;
KEGG GENES
KEGG GENES(79677)
;
GeneCard
SMC6
;
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Curation status
Auto-annotated
Notes
NA
Related H-InvDB links
Gene family;
Similarity Search Tool;
TACT
;
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.
NA