H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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Locus view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS

H-Invitational ID: HIT000001798 Accession number: AF077054 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Similar to Cold shock domain-containing protein E1; Protein UNR; Fragment;

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Transcript original information Accession number AF077054.1 CAGE tag ID NA EST ID NA Clone Number NA Experimental resources   NBRC ; HGPD ; Antibody (CSDE1) ; Catalog (CSDE1); Sequence data provider Provider:CHGC;  Annotation project H-Invitational FLcDNA Length of cDNA 3581[bp] (No. of exon:19)[A:1093 T:1016 G:796 C:676] Devision HTC Molecular type mRNA Library origin Cell type NA Tissue type pituitary Develpmental stage NA

Sequence quality information CDS feature Complete CDS Kozak sequence NA PolyA Site: 3573(+) Vector/adapter sequence NA Frame shift 694-694[bp] Insertion(A); Remaining intron NA Splice site acceptor (NAGNAG) CAGGAG;  TAGGAG;  Transcript quality feature Truncation;  Notes NA

GCGGCGCTGGAGAGGGGGCGCTGAGCTGTTGGGTATGAAGTGTAACAGAA CAGACTTTACCACCTGAAACTGCTGCTTCAAGTTCAGATCAGGCAAGGAA CAAACCTCGTAACAACTAACAAGACCAAAGAAGAGTACACTTAAGTTGAA GACACAACACTTGATCTGAAACAAGAAGTTTGTGCCTACTCAACAGCTTT GAAAGAGCACTTCCCAACGCTGCTAGTAGTCTTTGTTTTCTTCAGTGCTG TACTGTGAGATTGCCCGGTACAGCAGCAGTTGTATTCTTTATTAGCTTGG TAGATCATTTTCTCTCGCTCTTTTTTTTAATACTAGCAACTTTCATCCTT TGAAACGTGTGCTGAAAAAGAAGAATCAGCAAATACTACTGAAAGTGCAA TATTTGAGTATCACTGCGAGATGAGCTTTGATCCAAACCTTCTCCACAAC AATGGACATAATGGGTACCCTAATGGTACTTCAGCAGCACTGCGTGAAAC TGGGGTTATTGGAAAACTGTTAACCTCTTACGGATTTATTCAGTGTTCAG AACGTCAAGCTAGACTTTTCTTCCACTGTTCACAGTATAATGGCAACCTG CAAGACTTAAAAGTAGGAGATGATGTTGAATTTGAAGTATCATCGGACCG ACGGACTGGGAAACCCATTGCTGTTAAACTGGTGAAGATAAAACAAGAAA TCCTCCCGAAGAACGAATGAATGGACAAGAAGTGTTTTATCTGACTTACA CCCCTGAAGATGTCGAAGGGAACGTTCAGCTGGAAACTGGAGATAAAATA AACTTTGTAATTGATAACAATAAACATACTGGTGCTGTAAGTGCTCGCAA CATTATGCTGTTGAAAAAGAAACAAGCCCGCTGTCAGGGAGTAGTTTGTG CCATGAAGGAGGCATTTGGCTTTATTGAAAGAGGTGATGTTGTAAAAGAG ATATTCTTTCACTATAGTGAATTTAAGGGTGACTTAGAAACCTTACAGCC TGGCGATGATGTGGAATTCACAATCAAGGACAGAAATGGTAAAGAAGTTG CACCAGATGTCAGACTATTGCCTCAAGGAACAGTCATTTTTGAAGATATC AGCATTGAACATTTTGAAGGAACTGTAACCAAAGTTATCCCAAAAGTACC CAGTAAAAACCAGAATGACCCATTGCCAGGACGCATCAAAGTTGACTTTG TGATCCCTAAAGAACTTCCCTTTGGAGACAAAGATACGAAATCCAAGGTG ACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACG TGACAAATTAGAGCGAGCAACCAATATAGAAGTTCTGTCAAATACATTTC AGTTCACTAATGAAGCCCGAGAAATGGGTGTGATTGCTGCCATGAGAGAT GGTTTTGGTTTCCATCCAAGTGTGTGGATCCGTGAATGTTCCGTATGTTC CTTCCCACTTCCAGTGAAATTCTGGATGGGAACCAGCTCCCATATTGCAG ATGAAGTAGAGTTTACTGTGGTTCCTGATATGCTCTCTGCTCAAAGAAAT CATGCTATTAGGATTAAAAAACTTCCCAAGGGCACGGTTTCATTTCATTC CCATTCAGATCACCGTTTTCTGGGCACGGTAGAAAAAGAAGCCACTTTTT CCAATCCTAAAACCACTAGCCCAAATAAAGGCAAAGAGAAGGAGGCTGAG GATGGCATTATTGCTTATGATGACTGTGGGGTGAAACTGACTATTGCTTT TCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAGG TTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGGTTGCAACT TGTGTGCGACTTTTAGGTCGTAATTCTAACTCCAAGAGGCTCTTGGGTTA TGTGGCAACTCTGAAGGATAATTTTGGATTTATTGAAACAGCCAATCATG ATAAGGAAATCTTTTTCCATTACAGTGAGTTCTCTGGTGATGTTGATAGC CTGGAACTGGGGGACATGGTCGAGTATAGCTTGTCCAAAGGCAAAGGCAA CAAAGTCAGTGCAGAAAAAGTGAACAAAACACACTCAGTGAATGGCATTA CTGAGGAAGCTGATCCCACCATTTACTCTGGCAAAGTAATTCGCCCCCTG AGGAGTGTTGATCCAACACAGACTGAGTACCAAGGAATGATTGAGATTGT GGAGGAGGGCGATATGAAAGGTGAGGTCTATCCATTTGGCATCGTTGGGA TGGCCAACAAAGGGGATTGCCTGCAGAAAGGGGAGAGCGTCAAGTTCCAA TTGTGTGTCCTGGGCCAAAATGCACAAACTATGGCTTACAACATCACACC CCTGCGCAGGGCCACAGTGGAATGTGTGAAAGATCAGTTTGGCTTCATTA ACTATGAAGTAGGAGATAGCAAGAAGCTCTTTTTCCATGTGAAAGAAGTT CAGGATGGCATTGAGCTACAGGCAGGAGATGAGGTGGAGTTCTCAGTGAT TCTTAATCAGCGCACTGGCAAGTGCAGCGCCTGTAATGTTTGGCGAGTCT GTGAGGGCCCCAAGGCTGTTGCAGCTCCTCGACCTGATCGGTTGGTCAAT CGCTTGAAGAATATCACTCTGGATGATGCCAGTGCTCCTCGCCTAATGGT TCTTCGTCAGCCAAGGGGACCAGATAACTCAATGGGGTTTGGTGCAGAAA GAAAGATCCGTCAAGCTGGTGTCATTGACTAACCACATCCACAAAGCACA CCATTAATCCACTATGATCAAGTTGGGGGGAATCTGGTGAAGGGTTCTGA ATATCTCCCTCTTCATCCCTCCCGAAATCTGGAATACTTATTCTATTGAG CTATTACACCAGTTTTAACACCTTCCTCGTGTTATGTTTAAAAAAATAAA TAAATTTAAGAAAACCATTTTAAATAATGCACAGTTGCAGCCTGGAAAAA CTTAAGGTGGCGCCTTATAGTATCAATTTTAGGAGCTTTATTTGGTGCAT TTAACGCAACTGGTAATTGCAGAATCCACTTTGCCTGTGTAAGTGAAAAA TATAGACTGTTATCTTGTTGGCCCTATGAAATTCTGCACTTTTCATTATA TACTCTACCTTCATTAATTACTTCTGGCAAGATGTTCTGCCTTAGCACTC AGTTGCATTCTTTTCCTTTTTCTTCCTGTTCATTATGCTTTAATTCTGAG GACCATATGAGGGTAGAATATATTATCTTTTAAAAATTACAAAAATTTGT ATAGGCAAACCATTTCTTAAAGTTGATGGGCCAAATTTTAAAATGTTATT TTTCATATCATTTATAATCTTGTCACAATCCACTTAAAGAAGTTTGGTTA TATTTCAGTGAAAATTTTCTTCCAGAGTAGGTTTTTTTTCGTGGGTTGGG GGGGTAACTTTACTACAATTAGGTAAGTATGGTGCAGAATTTCATGCAAA TGAGGAGTGCCAGCAGTGTGATAATTTAAACATATTTAAACAAAAACAAA AAAATGAATGCACAAACTTGCTGCTGCTTAGATCACTGCAGCTTCTAGGA CCCGGTTTCTTTTACTGATTTAAAAAAAAAA