H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID: HIT000001798 Accession number: AF077054 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Similar to Cold shock domain-containing protein E1; Protein UNR; Fragment;
 
 

Motif information
ORF

length(671),orf(717:2732)
MNGQEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVE
FTIKDRNGKEVAPDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQN
DPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLER
ATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFHPSVWIRECSVCSFPLPV
KFWMGTSSHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSDHR
FLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDV
EGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLK
DNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAE
KVNKTHSVNGITEEADPTIYSGKVIRPLRSVDPTQTEYQGMIEIVEEGDM
KGEVYPFGIVGMANKGDCLQKGESVKFQLCVLGQNAQTMAYNITPLRRAT
VECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFSVILNQRT
GKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPR
GPDNSMGFGAERKIRQAGVID*
a.a.
length
InterPro Name
length(87), motif(38:124) 87 IPR016027 Nucleic acid-binding, OB-fold-like [Domain]
length(62), motif(55:116) 62 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(62), motif(57:118) 62 IPR011129 Cold shock protein [Domain]
length(53), motif(65:117) 53 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(20), motif(67:86) 20 IPR019844 Cold-shock conserved site [Conserved_site]
length(92), motif(201:292) 92 IPR016027 Nucleic acid-binding, OB-fold-like [Domain]
length(60), motif(330:389) 60 IPR016027 Nucleic acid-binding, OB-fold-like [Domain]
length(65), motif(391:455) 65 IPR016027 Nucleic acid-binding, OB-fold-like [Domain]
length(63), motif(392:454) 63 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(63), motif(393:455) 63 IPR011129 Cold shock protein [Domain]
length(53), motif(401:453) 53 IPR012340 Nucleic acid-binding, OB-fold [Domain]
length(20), motif(403:422) 20 IPR019844 Cold-shock conserved site [Conserved_site]
length(89), motif(529:617) 89 IPR016027 Nucleic acid-binding, OB-fold-like [Domain]
length(64), motif(548:611) 64 IPR011129 Cold shock protein [Domain]
length(63), motif(548:610) 63 IPR002059 Cold-shock protein, DNA-binding [Domain]
length(53), motif(556:608) 53 IPR012340 Nucleic acid-binding, OB-fold [Domain]