H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID: HIT000001798 Accession number: AF077054 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Similar to Cold shock domain-containing protein E1; Protein UNR; Fragment;
 
 

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000001798
H-Inv cluster ID Locus viewHIX0000915
Accession number AF077054.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition Similar to Cold shock domain-containing protein E1; Protein UNR; Fragment;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P29174)  [Identity/coverage = 100.0%/100.0%] to Cavia porcellus (Guinea pig). protein.
Experimental evidence Protein evidence
PubMed ID 1622933ALL
Gene family/group Gene family H-Inv gene family/group ID HIF0003660
Gene family/group name Cold-shock protein, DNA-binding (IPR002059).
Evidence motif (InterPro) ID IPR002059
Gene symbol/name HGNC symbol CSDE1
HGNC aliases NA
HGNC name cold shock domain containing E1, RNA-binding
DDBJ NA
UniProt CSDE1
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000335279
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_002524NM_007158NM_001007553NM_001130523
Ensembl ENST00000261443ENST00000339438ENST00000358528ENST00000369530ENST00000369535ENST00000438362ENST00000483030ENST00000483407ENST00000524652ENST00000525132ENST00000525878ENST00000525970ENST00000529046ENST00000530784ENST00000530886ENST00000533818ENST00000534389ENST00000534699
Entrez Gene Entrez Gene ID:7812
KEGG GENES KEGG GENES(7812)
GeneCard GeneCardCSDE1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Cold-shock protein, DNA-binding (IPR002059). Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA