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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000001329 Accession number: AB046834 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Uncharacterized protein KIAA1614;
 
 

Transcript original information
Accession number AB046834.1
CAGE tag ID NA
EST ID NA
Clone Number fj12973
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ;
Sequence data provider Provider:KDRI
Annotation project H-Invitational FLcDNA
Length of cDNA 4143[bp] (No. of exon:9)[A:833 T:667 G:1323 C:1320]
Devision HUM
Molecular type mRNA
Library origin Cell type NA
Tissue type NA
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature Complete CDS
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) CAGGAG; 
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0001392
Genomic location  G-integra Help Chromosome 1
Location 1q25.3
Position 180882325- 180915239
Strand +
Possible duplicated location(s) NA
Gene structure 9 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:57710
KEGG GENES KEGG GENES(57710)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Predicted CDS information
HIP ID HIP000046783
Predicted CDS 56..3628;  1190[aa];  Orientation:+2; 
Codon Adaptation Index (CAI). 0.811

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000001329
H-Inv cluster ID Locus viewHIX0001392
Accession number AB046834.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Coding potential  Help Protein coding; 
Definition Uncharacterized protein KIAA1614;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q5VZ46)  [Identity/coverage = 99.748%/100.0%] to Homo sapiens (Human). protein.
Experimental evidence Protein evidence
PubMed ID 109978771470203916710414ALL
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
DDBJ KIAA1614
UniProt KIAA1614
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000046783
No. of interaction 2
Interaction partner(s) HIP000074605HIP000338218
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:57710
KEGG GENES KEGG GENES(57710)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Human curated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA


Subcellular localization information  Last modified:27-May-2015
WoLF PSORT nuclear;  cytosol; 
Target P Other
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Protein structure information (GTOP) GTOP Last modified:27-May-2015
Start End PDB_ID E-value Identity Coverage SCOP_ID
1008 1078 1o8rA 2e-12 23.9 67/100 d.234.1.1
Related H-InvDB links GTOP GTOP

Gene expression information  H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus NA
HG-U133 215367_at; 
HG-U133A 215367_at; 
HG-U133A_2 215367_at; 
HG-U133B NA
HG-U133_Plus_2 215367_at; 
HG-U95 NA
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2370207;  2370212;  2370213;  2370214;  2370215;  2370216;  2370217;  2370218;  2370219;  2370222;  2370234;  2370235;  2370236;  2370237;  2370238;  2370239;  2370240;  2370256;  2370257;  2446576;  2446590; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Evolutionary information  Evola Help Last modified:27-May-2015
Relationship Species Accession number MGI Links
Orthology Bos sp. (Cow) ENSBTAT00000008215 G-integraG-integra
Orthology Canis sp. (Dog) ENSCAFT00000020339 G-integraG-integra
Orthology Pongo sp. (Orangutan) ENSPPYT00000000533 G-integraG-integra
Orthology Pan sp. (Chimpanzee) ENSPTRT00000003163 G-integraG-integra
Orthology Rattus sp. (Rat) ENSRNOT00000004704 G-integraG-integra
Orthology Takifugu sp. (Fugu) SINFRUT00000154654 G-integraG-integra
Orthology Macaca sp. (Macaque) XM_001111115 G-integraG-integra
Orthology Monodelphis sp. (Opossum) XM_001374628 G-integraG-integra
Orthology Equus sp. (Horse) XM_001488875 G-integraG-integra
Orthology Mus sp. (Mouse) XM_148974 G-integraG-integra
Orthology Gallus sp. (Chicken) XM_422257 G-integraG-integra
Orthology Danio sp. (Zebrafish) XM_690127 G-integraG-integra
Phylogenetic tree [View by ATV]
Neighbor-joining (phb) 
Related H-InvDB links EvolaEvoladN/dS (under constraction); 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
39 .. 39 C/T rs183675069 + 5'UTR
71 .. 71 G/T rs12756225 + CDS Nonsynonymous[Ala6Ser]
106 .. 106 A/G rs187389379 + CDS Synonymous[Gln17Gln]
139 .. 139 C/T rs149264713 + CDS Synonymous[Pro28Pro]
150 .. 150 C/T rs112657356 + CDS Nonsynonymous[Thr32Ile]
193 .. 193 C/T rs201755087 + CDS Synonymous[Asn46Asn]
246 .. 246 C/T rs10732273 + CDS Nonsynonymous[Pro64Leu]
247 .. 247 G/A rs200026948 + CDS Synonymous[Pro64Pro]
252 .. 252 C/T rs200657202 + CDS Nonsynonymous[Ala66Val]
294 .. 294 C/G rs201907347 + CDS Nonsynonymous[Pro80Arg]
352 .. 352 G/A rs200763427 + CDS Synonymous[Gln99Gln]
406 .. 406 A/G rs190608612 + CDS Synonymous[Gln117Gln]
413 .. 413 C/T rs201123018 + CDS AA-STOP[Arg120*]
502 .. 502 T/C rs200063298 + CDS Synonymous[Asp149Asp]
514 .. 514 C/T rs200317123 + CDS Synonymous[Asp153Asp]
515 .. 515 G/A rs183595049 + CDS Nonsynonymous[Gly154Ser]
570 .. 570 C/T rs200901437 + CDS Nonsynonymous[Pro172Leu]
584 .. 584 C/T rs202038677 + CDS Nonsynonymous[Arg177Cys]
657 .. 657 C/T rs199998538 + CDS Nonsynonymous[Pro201Leu]
658 .. 658 G/A rs74133667 + CDS Synonymous[Pro201Pro]
690 .. 690 C/T rs114348822 + CDS Nonsynonymous[Pro212Leu]
695 .. 695 C/T rs3747959 - CDS Nonsynonymous[His214Tyr]
709 .. 709 C/T rs12082445 + CDS Synonymous[Pro218Pro]
725 .. 725 C/T rs201707736 + CDS Nonsynonymous[Pro224Ser]
829 .. 829 C/T rs202029251 + CDS Synonymous[Ser258Ser]
855 .. 855 C/T rs61811250 + CDS Nonsynonymous[Pro267Leu]
879 .. 879 G/A rs77981586 + CDS Nonsynonymous[Arg275His]
942 .. 942 G/A rs201745892 + CDS Nonsynonymous[Arg296Gln]
956 .. 956 C/T rs79485039 + CDS Nonsynonymous[Arg301Cys]
957 .. 957 G/A rs200280666 + CDS Nonsynonymous[Arg301His]
978 .. 978 T/A rs200432155 + CDS Nonsynonymous[Leu308His]
1001 .. 1001 C/T rs201390442 + CDS Nonsynonymous[Arg316Cys]
1002 .. 1002 G/A rs77550702 + CDS Nonsynonymous[Arg316His]
1032 .. 1032 C/T rs77695365 + CDS Nonsynonymous[Ser326Phe]
1056 .. 1056 G/A rs201506771 + CDS Nonsynonymous[Arg334Gln]
1100 .. 1100 G/A rs200852158 + CDS Nonsynonymous[Asp349Asn]
1106 .. 1106 G/A rs200591163 + CDS Nonsynonymous[Gly351Ser]
1120 .. 1120 T/C rs3747958 - CDS Synonymous[Thr355Thr]
1138 .. 1138 G/A rs184914756 + CDS Synonymous[Glu361Glu]
1185 .. 1185 G/A rs140222211 + CDS Nonsynonymous[Arg377His]
1191 .. 1191 G/A rs111709771 + CDS Nonsynonymous[Arg379His]
1234 .. 1234 C/T rs147681091 + CDS Synonymous[Ile393Ile]
1235 .. 1235 G/A rs201202855 + CDS Nonsynonymous[Val394Met]
1259 .. 1259 C/T rs150309236 + CDS AA-STOP[Arg402*]
1260 .. 1260 G/A rs201563384 + CDS Nonsynonymous[Arg402Gln]
1372 .. 1372 C/T rs200615371 + CDS Synonymous[His439His]
1377 .. 1377 C/T rs144390511 + CDS Nonsynonymous[Pro441Leu]
1433 .. 1433 G/A rs200055814 + CDS Nonsynonymous[Ala460Thr]
1598 .. 1598 C/T rs201310531 + CDS Nonsynonymous[Leu515Phe]
1707 .. 1707 G/A rs146608925 + CDS Nonsynonymous[Gly551Glu]
1724 .. 1724 C/T rs200728905 + CDS Nonsynonymous[Pro557Ser]
1760 .. 1760 A/C rs201379780 + CDS Nonsynonymous[Met569Leu]
1793 .. 1793 C/T rs201731426 + CDS Nonsynonymous[Leu580Phe]
1809 .. 1809 C/T rs200812904 + CDS Nonsynonymous[Ala585Val]
1877 .. 1877 G/C rs139066333 + CDS Nonsynonymous[Val608Leu]
1878 .. 1878 T/C rs200170063 + CDS Nonsynonymous[Val608Ala]
1915 .. 1915 C/T rs192741655 + CDS Synonymous[Asn620Asn]
1931 .. 1931 G/C rs182446414 + CDS Nonsynonymous[Glu626Gln]
1934 .. 1934 G/A rs202196321 + CDS Nonsynonymous[Glu627Lys]
1961 .. 1961 G/A rs188274594 + CDS Nonsynonymous[Ala636Thr]
1962 .. 1962 C/T rs113108579 + CDS Nonsynonymous[Ala636Val]
2066 .. 2066 C/T rs149910072 + CDS Nonsynonymous[Leu671Phe]
2122 .. 2122 G/A rs56104489 + CDS Synonymous[Val689Val]
2273 .. 2273 C/T rs17302207 + CDS Nonsynonymous[Arg740Trp]
2304 .. 2304 C/T rs79791475 + CDS Nonsynonymous[Thr750Ile]
2317 .. 2317 G/T rs201220751 + CDS Synonymous[Thr754Thr]
2354 .. 2354 A/G rs144874037 + CDS Nonsynonymous[Thr767Ala]
2362 .. 2362 T/C rs3795505 - CDS Synonymous[Ser769Ser]
2387 .. 2387 C/T rs200156750 + CDS Nonsynonymous[Pro778Ser]
2433 .. 2433 A/C rs114151345 + CDS Nonsynonymous[Gln793Pro]
2458 .. 2458 T/G rs3795504 - CDS Nonsynonymous[Phe801Leu]
2482 .. 2482 C/T rs192554753 + CDS Synonymous[Thr809Thr]
2628 .. 2628 C/T rs201792192 + CDS Nonsynonymous[Pro858Leu]
2651 .. 2651 C/T rs200245151 + CDS Nonsynonymous[Arg866Cys]
2704 .. 2704 C/T rs3795503 - CDS Synonymous[Asn883Asn]
2749 .. 2749 C/T rs199668431 + CDS Synonymous[His898His]
2800 .. 2800 G/C rs201348973 + CDS Synonymous[Leu915Leu]
2869 .. 2869 G/A rs200033632 + CDS Synonymous[Thr938Thr]
2957 .. 2957 G/A rs200646040 + CDS Nonsynonymous[Gly968Arg]
2993 .. 2993 A/G rs201945338 + CDS Nonsynonymous[Thr980Ala]
3055 .. 3055 A/G rs201536429 + CDS Nonsynonymous[Ile1000Met]
3089 .. 3089 G/A rs182637463 + CDS Nonsynonymous[Ala1012Thr]
3157 .. 3157 C/T rs186953945 + CDS Synonymous[Pro1034Pro]
3162 .. 3162 C/T rs199548006 + CDS Nonsynonymous[Pro1036Leu]
3190 .. 3190 C/A rs144194721 + CDS Synonymous[Ala1045Ala]
3214 .. 3214 G/A rs200460542 + CDS Synonymous[Pro1053Pro]
3234 .. 3234 G/A rs201368205 + CDS Nonsynonymous[Arg1060His]
3287 .. 3287 G/A rs2331995 + CDS Nonsynonymous[Asp1078Asn]
3357 .. 3357 C/T rs116827264 + CDS Nonsynonymous[Ser1101Leu]
3384 .. 3384 A/G rs140904251 + CDS Nonsynonymous[Asp1110Gly]
3386 .. 3386 G/A rs187093177 + CDS Nonsynonymous[Val1111Met]
3409 .. 3409 C/T rs200225289 + CDS Synonymous[Arg1118Arg]
3424 ^ 3425 -/G rs35620345 + CDS
3438 .. 3438 C/T rs199791116 + CDS Nonsynonymous[Pro1128Leu]
3442 .. 3442 C/T rs149708476 + CDS Synonymous[Asp1129Asp]
3443 .. 3443 G/A rs201859148 + CDS Nonsynonymous[Gly1130Ser]
3566 .. 3566 G/A rs145566296 + CDS Nonsynonymous[Gly1171Ser]
3631 .. 3631 C/T rs202098581 + 3'UTR
3771 .. 3771 G/A rs79222060 + 3'UTR
3838 .. 3838 A/G rs140582955 + 3'UTR
3863 .. 3863 G/A rs11588523 + 3'UTR
3870 .. 3870 T/C rs12023606 + 3'UTR
3911 .. 3911 G/A rs116509877 + 3'UTR
3943 .. 3943 G/A rs111967847 + 3'UTR
4003 .. 4003 C/G rs10157421 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
Type Start End Strand
L2 2886 2968 -
AluSq2 3863 4143 +
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer