H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID:
HIT000000711
Accession number:
AB023211
Created date:
26-Mar-2013
Last modified:
27-May-2015
Definition:
Protein-arginine deiminase type-2; EC=3.5.3.15; PAD-H19; Peptidylarginine deiminase II; Protein-arginine deiminase type II;
Select format
Flat file
XML file
Nucleotide sequence fasta
Protein sequence fasta
Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information
Single Nucleotide Polymorphism (SNP) and indel
Location
Variation
dbSNP ID
Strand
CDS/UTR
Translation
21 .. 21
C/G
rs2647176
-
5'UTR
145 .. 145
C/T
rs201815340
-
CDS
Synonymous[Thr27Thr]
159 .. 159
C/T
rs148878349
-
CDS
Nonsynonymous[Ala32Val]
170 .. 170
G/C
rs143710553
-
CDS
Nonsynonymous[Gly36Arg]
184 .. 184
C/T
rs200819715
-
CDS
Synonymous[Phe40Phe]
199 .. 199
G/A
rs142131770
-
CDS
Synonymous[Ser45Ser]
206 .. 206
G/A
rs199639325
-
CDS
Nonsynonymous[Val48Met]
217 .. 217
G/C
rs201441508
-
CDS
Nonsynonymous[Glu51Asp]
279 .. 279
C/T
rs144200280
-
CDS
Nonsynonymous[Ser72Leu]
294 .. 294
T/G
rs150907149
-
CDS
Nonsynonymous[Leu77Arg]
296 .. 296
C/T
rs187842443
-
CDS
Nonsynonymous[Arg78Trp]
322 .. 322
C/T
rs147295126
-
CDS
Synonymous[Thr86Thr]
354 .. 354
A/G
rs184297816
-
CDS
Nonsynonymous[Tyr97Cys]
362 .. 362
G/A
rs140400053
-
CDS
Nonsynonymous[Glu100Lys]
406 .. 406
A/G
rs34737582
-
CDS
Synonymous[Thr114Thr]
419 .. 419
T/C
rs28537669
-
CDS
Nonsynonymous[Ser119Pro]
428 .. 428
G/A
rs185176493
-
CDS
Nonsynonymous[Val122Met]
439 .. 439
C/A
rs200541775
-
CDS
Nonsynonymous[Asp125Glu]
492 .. 492
G/T
rs201038666
-
CDS
Nonsynonymous[Gly143Val]
497 .. 497
G/A
rs201884124
-
CDS
Nonsynonymous[Glu145Lys]
509 .. 509
G/A
rs34847454
-
CDS
Nonsynonymous[Ala149Thr]
534 .. 534
G/A
rs138321729
-
CDS
Nonsynonymous[Arg157Gln]
598 .. 598
C/T
rs11203297
-
CDS
Synonymous[Leu178Leu]
637 .. 637
C/T
rs145669805
-
CDS
Synonymous[Pro191Pro]
652 .. 652
C/G
rs140150031
-
CDS
Synonymous[Ala196Ala]
659 .. 659
G/A
rs139964224
-
CDS
Nonsynonymous[Glu199Lys]
668 .. 668
C/G
rs140044695
-
CDS
Nonsynonymous[Leu202Val]
730 .. 730
C/T
rs141669259
-
CDS
Synonymous[Phe222Phe]
737 .. 737
C/T
rs144432618
-
CDS
Nonsynonymous[Arg225Cys]
738 .. 738
G/A
rs138756249
-
CDS
Nonsynonymous[Arg225His]
762 .. 762
G/A
rs61749340
-
CDS
Nonsynonymous[Arg233Gln]
766 .. 766
G/A
rs150435087
-
CDS
Synonymous[Lys234Lys]
787 .. 787
C/T
rs35184728
-
CDS
Synonymous[Tyr241Tyr]
790 .. 790
G/A
rs147747254
-
CDS
Synonymous[Thr242Thr]
793 .. 793
T/G
rs2076615
+
CDS
Synonymous[Gly243Gly]
799 .. 799
C/T
rs201809367
-
CDS
Synonymous[Ser245Ser]
800 .. 800
G/A
rs199700044
-
CDS
Nonsynonymous[Ala246Thr]
818 .. 818
G/A
rs192937557
-
CDS
Nonsynonymous[Val252Met]
825 .. 825
G/A
rs200384530
-
CDS
Nonsynonymous[Gly254Asp]
829 .. 829
C/T
rs149914528
-
CDS
Synonymous[Leu255Leu]
839 .. 839
G/A
rs150731573
-
CDS
Nonsynonymous[Asp259Asn]
856 .. 856
C/G
rs142057029
-
CDS
Synonymous[Gly264Gly]
893 .. 893
G/A
rs202113399
-
CDS
Nonsynonymous[Ala277Thr]
901 .. 901
C/T
rs146031508
-
CDS
Synonymous[Asp279Asp]
906 .. 906
C/T
rs191431667
-
CDS
Nonsynonymous[Pro281Leu]
919 .. 919
C/T
rs138063655
-
CDS
Synonymous[Ile285Ile]
924 .. 924
C/T
rs147849202
-
CDS
Nonsynonymous[Thr287Met]
926 .. 926
G/A
rs149389436
-
CDS
Nonsynonymous[Asp288Asn]
931 .. 931
C/T
rs187500985
-
CDS
Synonymous[Thr289Thr]
932 .. 932
G/T
rs150208111
-
CDS
Nonsynonymous[Val290Leu]
941 .. 941
C/T
rs149752241
-
CDS
Nonsynonymous[Arg293Trp]
983 .. 983
G/A
rs138264071
-
CDS
Nonsynonymous[Val307Met]
1021 .. 1021
G/A
rs141844952
-
CDS
Synonymous[Leu319Leu]
1082 .. 1082
C/T
rs142403504
-
CDS
AA-STOP[Gln340*]
1104 .. 1104
G/T
rs145518490
-
CDS
Nonsynonymous[Arg347Leu]
1141 .. 1141
G/A
rs139824702
-
CDS
Synonymous[Glu359Glu]
1182 .. 1182
G/A
rs144164383
-
CDS
Nonsynonymous[Arg373Gln]
1195 .. 1195
A/G
rs201659518
-
CDS
Synonymous[Leu377Leu]
1315 .. 1315
G/A
rs150782078
-
CDS
Synonymous[Val417Val]
1319 .. 1319
G/A
rs148233687
-
CDS
Nonsynonymous[Val419Met]
1324 .. 1324
C/T
rs2057096
+
CDS
Synonymous[Asn420Asn]
1335 .. 1335
A/G
rs147031207
-
CDS
Nonsynonymous[Tyr424Cys]
1386 .. 1386
G/A
rs201295732
-
CDS
Nonsynonymous[Arg441Gln]
1406 .. 1406
C/A
rs138940135
-
CDS
Nonsynonymous[Arg448Ser]
1438 .. 1438
A/G
rs3818032
+
CDS
Synonymous[Ala458Ala]
1477 .. 1477
C/T
rs41306576
-
CDS
Synonymous[His471His]
1507 .. 1507
C/A
rs146438183
-
CDS
Synonymous[Ile481Ile]
1527 .. 1527
T/G
rs148391776
-
CDS
Nonsynonymous[Leu488Arg]
1562 .. 1562
C/T
rs201460964
-
CDS
Nonsynonymous[Leu500Phe]
1604 .. 1604
A/G
rs149737469
-
CDS
Nonsynonymous[Met514Val]
1613 .. 1613
G/T
rs150557436
-
CDS
Nonsynonymous[Gly517Cys]
1621 .. 1621
T/G
rs139976495
-
CDS
Synonymous[Gly519Gly]
1673 .. 1673
C/A
rs143012694
-
CDS
Nonsynonymous[Leu537Ile]
1681 .. 1681
G/A
rs72895211
-
CDS
Synonymous[Gln539Gln]
1708 .. 1708
A/G
rs2076595
+
CDS
Synonymous[Leu548Leu]
1726 .. 1726
C/T
rs201502539
-
CDS
Synonymous[Ile554Ile]
1775 .. 1775
G/A
rs140945853
-
CDS
Nonsynonymous[Ala571Thr]
1803 .. 1803
G/A
rs145297606
-
CDS
Nonsynonymous[Arg580His]
1819 .. 1819
C/T
rs11581590
-
CDS
Synonymous[Phe585Phe]
1825 .. 1825
C/T
rs202005847
-
CDS
Synonymous[Asn587Asn]
1829 .. 1829
G/T
rs147628040
-
CDS
Nonsynonymous[Val589Leu]
1856 .. 1856
C/G
rs139624393
-
CDS
Nonsynonymous[Leu598Val]
1886 .. 1886
G/A
rs138052296
-
CDS
Nonsynonymous[Val608Ile]
1902 .. 1902
G/A
rs184095805
-
CDS
Nonsynonymous[Cys613Tyr]
1919 .. 1919
C/T
rs149369913
-
CDS
Nonsynonymous[Arg619Cys]
1936 .. 1936
C/T
rs61731908
-
CDS
Synonymous[Pro624Pro]
1945 .. 1945
C/T
rs77285572
-
CDS
Synonymous[Leu627Leu]
1946 .. 1946
G/A
rs140482730
-
CDS
Nonsynonymous[Glu628Lys]
1961 .. 1961
G/A
rs148845742
-
CDS
Nonsynonymous[Asp633Asn]
1963 .. 1963
C/T
rs61731909
-
CDS
Synonymous[Asp633Asp]
2018 .. 2018
C/T
rs139141742
-
CDS
Nonsynonymous[Arg652Cys]
2026 .. 2026
G/A
rs117667852
-
CDS
Synonymous[Lys654Lys]
2076 .. 2076
C/G
rs191274660
-
3'UTR
2080 .. 2080
C/T
rs2076598
+
3'UTR
2093 .. 2093
C/T
rs112232456
-
3'UTR
2121 .. 2121
C/T
rs2076599
+
3'UTR
2241 .. 2241
A/G
rs183893016
-
3'UTR
2320 .. 2320
A/G
rs2235926
+
3'UTR
2340 .. 2340
A/C
rs146282937
-
3'UTR
2469 .. 2469
A/G
rs79659432
-
3'UTR
2508 .. 2508
G/A
rs193098639
-
3'UTR
2701 .. 2701
A/G
rs142379665
-
3'UTR
2721 .. 2721
G/A
rs41306574
-
3'UTR
2760 .. 2760
C/G
rs147740410
-
3'UTR
2784 .. 2784
T/C
rs188549021
-
3'UTR
2797 .. 2797
C/T
rs183087207
-
3'UTR
2826 .. 2826
C/T
rs2235927
+
3'UTR
2905 .. 2905
C/T
rs114817331
-
3'UTR
2978 .. 2978
G/A
rs10157387
-
3'UTR
2988 .. 2988
A/G
rs10157828
-
3'UTR
3084 .. 3084
A/C
rs202070587
-
3'UTR
3162 .. 3162
A/T
rs145700092
-
3'UTR
3226 .. 3226
C/T
rs190762551
-
3'UTR
3227 .. 3227
G/T
rs12133334
-
3'UTR
3267 .. 3267
A/G
rs79395834
-
3'UTR
3372 .. 3372
C/T
rs185606942
-
3'UTR
3379 .. 3379
C/T
rs114884058
-
3'UTR
3553 .. 3553
A/T
rs35058101
-
3'UTR
3555 .. 3555
C/T
rs2746533
+
3'UTR
3701 .. 3701
T/C
rs7516094
-
3'UTR
3712 .. 3712
T/C
rs7516087
-
3'UTR
3851 .. 3851
G/T
rs74227522
-
3'UTR
3852 .. 3852
T/G
rs201396641
-
3'UTR
3864 .. 3864
G/A
rs182833177
-
3'UTR
3885 .. 3885
T/C
rs79576296
-
3'UTR
3888 .. 3888
T/C
rs7515926
-
3'UTR
3902 .. 3902
T/-
rs35023393
-
3'UTR
4108 .. 4108
C/A
rs190984993
-
3'UTR
4125 .. 4125
T/G
rs74847260
-
3'UTR
4276 .. 4276
G/A
rs185976330
-
3'UTR
Microsatellite (Short Tandem Repeat, STR)
No data available
Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Repeat
Type
Start
End
Strand
L2b
3362
3484
-
Database links
Human-Gene diversity Of Life-style related Diseases(H-GOLD)
;
Related H-InvDB links
VaryGene
;
Repeat Mask Viewer
;