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H-InvDB_9.0 released on May 27, 2015.
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H-Invitational ID: HIT000000711 Accession number: AB023211 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Protein-arginine deiminase type-2; EC=3.5.3.15; PAD-H19; Peptidylarginine deiminase II; Protein-arginine deiminase type II;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
21 .. 21 C/G rs2647176 - 5'UTR
145 .. 145 C/T rs201815340 - CDS Synonymous[Thr27Thr]
159 .. 159 C/T rs148878349 - CDS Nonsynonymous[Ala32Val]
170 .. 170 G/C rs143710553 - CDS Nonsynonymous[Gly36Arg]
184 .. 184 C/T rs200819715 - CDS Synonymous[Phe40Phe]
199 .. 199 G/A rs142131770 - CDS Synonymous[Ser45Ser]
206 .. 206 G/A rs199639325 - CDS Nonsynonymous[Val48Met]
217 .. 217 G/C rs201441508 - CDS Nonsynonymous[Glu51Asp]
279 .. 279 C/T rs144200280 - CDS Nonsynonymous[Ser72Leu]
294 .. 294 T/G rs150907149 - CDS Nonsynonymous[Leu77Arg]
296 .. 296 C/T rs187842443 - CDS Nonsynonymous[Arg78Trp]
322 .. 322 C/T rs147295126 - CDS Synonymous[Thr86Thr]
354 .. 354 A/G rs184297816 - CDS Nonsynonymous[Tyr97Cys]
362 .. 362 G/A rs140400053 - CDS Nonsynonymous[Glu100Lys]
406 .. 406 A/G rs34737582 - CDS Synonymous[Thr114Thr]
419 .. 419 T/C rs28537669 - CDS Nonsynonymous[Ser119Pro]
428 .. 428 G/A rs185176493 - CDS Nonsynonymous[Val122Met]
439 .. 439 C/A rs200541775 - CDS Nonsynonymous[Asp125Glu]
492 .. 492 G/T rs201038666 - CDS Nonsynonymous[Gly143Val]
497 .. 497 G/A rs201884124 - CDS Nonsynonymous[Glu145Lys]
509 .. 509 G/A rs34847454 - CDS Nonsynonymous[Ala149Thr]
534 .. 534 G/A rs138321729 - CDS Nonsynonymous[Arg157Gln]
598 .. 598 C/T rs11203297 - CDS Synonymous[Leu178Leu]
637 .. 637 C/T rs145669805 - CDS Synonymous[Pro191Pro]
652 .. 652 C/G rs140150031 - CDS Synonymous[Ala196Ala]
659 .. 659 G/A rs139964224 - CDS Nonsynonymous[Glu199Lys]
668 .. 668 C/G rs140044695 - CDS Nonsynonymous[Leu202Val]
730 .. 730 C/T rs141669259 - CDS Synonymous[Phe222Phe]
737 .. 737 C/T rs144432618 - CDS Nonsynonymous[Arg225Cys]
738 .. 738 G/A rs138756249 - CDS Nonsynonymous[Arg225His]
762 .. 762 G/A rs61749340 - CDS Nonsynonymous[Arg233Gln]
766 .. 766 G/A rs150435087 - CDS Synonymous[Lys234Lys]
787 .. 787 C/T rs35184728 - CDS Synonymous[Tyr241Tyr]
790 .. 790 G/A rs147747254 - CDS Synonymous[Thr242Thr]
793 .. 793 T/G rs2076615 + CDS Synonymous[Gly243Gly]
799 .. 799 C/T rs201809367 - CDS Synonymous[Ser245Ser]
800 .. 800 G/A rs199700044 - CDS Nonsynonymous[Ala246Thr]
818 .. 818 G/A rs192937557 - CDS Nonsynonymous[Val252Met]
825 .. 825 G/A rs200384530 - CDS Nonsynonymous[Gly254Asp]
829 .. 829 C/T rs149914528 - CDS Synonymous[Leu255Leu]
839 .. 839 G/A rs150731573 - CDS Nonsynonymous[Asp259Asn]
856 .. 856 C/G rs142057029 - CDS Synonymous[Gly264Gly]
893 .. 893 G/A rs202113399 - CDS Nonsynonymous[Ala277Thr]
901 .. 901 C/T rs146031508 - CDS Synonymous[Asp279Asp]
906 .. 906 C/T rs191431667 - CDS Nonsynonymous[Pro281Leu]
919 .. 919 C/T rs138063655 - CDS Synonymous[Ile285Ile]
924 .. 924 C/T rs147849202 - CDS Nonsynonymous[Thr287Met]
926 .. 926 G/A rs149389436 - CDS Nonsynonymous[Asp288Asn]
931 .. 931 C/T rs187500985 - CDS Synonymous[Thr289Thr]
932 .. 932 G/T rs150208111 - CDS Nonsynonymous[Val290Leu]
941 .. 941 C/T rs149752241 - CDS Nonsynonymous[Arg293Trp]
983 .. 983 G/A rs138264071 - CDS Nonsynonymous[Val307Met]
1021 .. 1021 G/A rs141844952 - CDS Synonymous[Leu319Leu]
1082 .. 1082 C/T rs142403504 - CDS AA-STOP[Gln340*]
1104 .. 1104 G/T rs145518490 - CDS Nonsynonymous[Arg347Leu]
1141 .. 1141 G/A rs139824702 - CDS Synonymous[Glu359Glu]
1182 .. 1182 G/A rs144164383 - CDS Nonsynonymous[Arg373Gln]
1195 .. 1195 A/G rs201659518 - CDS Synonymous[Leu377Leu]
1315 .. 1315 G/A rs150782078 - CDS Synonymous[Val417Val]
1319 .. 1319 G/A rs148233687 - CDS Nonsynonymous[Val419Met]
1324 .. 1324 C/T rs2057096 + CDS Synonymous[Asn420Asn]
1335 .. 1335 A/G rs147031207 - CDS Nonsynonymous[Tyr424Cys]
1386 .. 1386 G/A rs201295732 - CDS Nonsynonymous[Arg441Gln]
1406 .. 1406 C/A rs138940135 - CDS Nonsynonymous[Arg448Ser]
1438 .. 1438 A/G rs3818032 + CDS Synonymous[Ala458Ala]
1477 .. 1477 C/T rs41306576 - CDS Synonymous[His471His]
1507 .. 1507 C/A rs146438183 - CDS Synonymous[Ile481Ile]
1527 .. 1527 T/G rs148391776 - CDS Nonsynonymous[Leu488Arg]
1562 .. 1562 C/T rs201460964 - CDS Nonsynonymous[Leu500Phe]
1604 .. 1604 A/G rs149737469 - CDS Nonsynonymous[Met514Val]
1613 .. 1613 G/T rs150557436 - CDS Nonsynonymous[Gly517Cys]
1621 .. 1621 T/G rs139976495 - CDS Synonymous[Gly519Gly]
1673 .. 1673 C/A rs143012694 - CDS Nonsynonymous[Leu537Ile]
1681 .. 1681 G/A rs72895211 - CDS Synonymous[Gln539Gln]
1708 .. 1708 A/G rs2076595 + CDS Synonymous[Leu548Leu]
1726 .. 1726 C/T rs201502539 - CDS Synonymous[Ile554Ile]
1775 .. 1775 G/A rs140945853 - CDS Nonsynonymous[Ala571Thr]
1803 .. 1803 G/A rs145297606 - CDS Nonsynonymous[Arg580His]
1819 .. 1819 C/T rs11581590 - CDS Synonymous[Phe585Phe]
1825 .. 1825 C/T rs202005847 - CDS Synonymous[Asn587Asn]
1829 .. 1829 G/T rs147628040 - CDS Nonsynonymous[Val589Leu]
1856 .. 1856 C/G rs139624393 - CDS Nonsynonymous[Leu598Val]
1886 .. 1886 G/A rs138052296 - CDS Nonsynonymous[Val608Ile]
1902 .. 1902 G/A rs184095805 - CDS Nonsynonymous[Cys613Tyr]
1919 .. 1919 C/T rs149369913 - CDS Nonsynonymous[Arg619Cys]
1936 .. 1936 C/T rs61731908 - CDS Synonymous[Pro624Pro]
1945 .. 1945 C/T rs77285572 - CDS Synonymous[Leu627Leu]
1946 .. 1946 G/A rs140482730 - CDS Nonsynonymous[Glu628Lys]
1961 .. 1961 G/A rs148845742 - CDS Nonsynonymous[Asp633Asn]
1963 .. 1963 C/T rs61731909 - CDS Synonymous[Asp633Asp]
2018 .. 2018 C/T rs139141742 - CDS Nonsynonymous[Arg652Cys]
2026 .. 2026 G/A rs117667852 - CDS Synonymous[Lys654Lys]
2076 .. 2076 C/G rs191274660 - 3'UTR
2080 .. 2080 C/T rs2076598 + 3'UTR
2093 .. 2093 C/T rs112232456 - 3'UTR
2121 .. 2121 C/T rs2076599 + 3'UTR
2241 .. 2241 A/G rs183893016 - 3'UTR
2320 .. 2320 A/G rs2235926 + 3'UTR
2340 .. 2340 A/C rs146282937 - 3'UTR
2469 .. 2469 A/G rs79659432 - 3'UTR
2508 .. 2508 G/A rs193098639 - 3'UTR
2701 .. 2701 A/G rs142379665 - 3'UTR
2721 .. 2721 G/A rs41306574 - 3'UTR
2760 .. 2760 C/G rs147740410 - 3'UTR
2784 .. 2784 T/C rs188549021 - 3'UTR
2797 .. 2797 C/T rs183087207 - 3'UTR
2826 .. 2826 C/T rs2235927 + 3'UTR
2905 .. 2905 C/T rs114817331 - 3'UTR
2978 .. 2978 G/A rs10157387 - 3'UTR
2988 .. 2988 A/G rs10157828 - 3'UTR
3084 .. 3084 A/C rs202070587 - 3'UTR
3162 .. 3162 A/T rs145700092 - 3'UTR
3226 .. 3226 C/T rs190762551 - 3'UTR
3227 .. 3227 G/T rs12133334 - 3'UTR
3267 .. 3267 A/G rs79395834 - 3'UTR
3372 .. 3372 C/T rs185606942 - 3'UTR
3379 .. 3379 C/T rs114884058 - 3'UTR
3553 .. 3553 A/T rs35058101 - 3'UTR
3555 .. 3555 C/T rs2746533 + 3'UTR
3701 .. 3701 T/C rs7516094 - 3'UTR
3712 .. 3712 T/C rs7516087 - 3'UTR
3851 .. 3851 G/T rs74227522 - 3'UTR
3852 .. 3852 T/G rs201396641 - 3'UTR
3864 .. 3864 G/A rs182833177 - 3'UTR
3885 .. 3885 T/C rs79576296 - 3'UTR
3888 .. 3888 T/C rs7515926 - 3'UTR
3902 .. 3902 T/- rs35023393 - 3'UTR
4108 .. 4108 C/A rs190984993 - 3'UTR
4125 .. 4125 T/G rs74847260 - 3'UTR
4276 .. 4276 G/A rs185976330 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
L2b 3362 3484 -
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer