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H-InvDB_8.3 released on March 26, 2013.
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H-Invitational ID: HIT000000208 Accession number: AB007961 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Similar to Metalloproteinase, extracellular matrix glycoprotein VMP3;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
292 .. 292 C/G rs117896783 - 5'UTR
881 .. 881 C/A rs117741584 - 5'UTR
1245 .. 1245 C/T rs77169234 - 5'UTR
1420 .. 1420 C/T rs12070869 - 5'UTR
1476 .. 1476 C/T rs12070863 - 5'UTR
1838 .. 1838 A/G rs1321637 - 5'UTR
2220 ^ 2221 -/T rs67286737 - CDS
2221 .. 2221 A/T rs117085887 - CDS Nonsynonymous[Asp25Val]
2221 ^ 2222 -/T rs11393317 - CDS
2228 ^ 2229 -/T rs71685934 - CDS
2229 ^ 2230 -/T rs66723035 - CDS
2237 .. 2237 C/T rs115422006 - CDS Synonymous[Phe30Phe]
2291 .. 2291 G/A rs12565973 - CDS Nonsynonymous[Met48Ile]
2495 .. 2495 G/T rs76930468 - 3'UTR
2501 .. 2501 G/A rs75401514 - 3'UTR
2553 .. 2553 T/C rs72711438 - 3'UTR
2563 .. 2563 T/G rs4297348 - 3'UTR
3077 .. 3077 C/T rs76390087 - 3'UTR
3176 .. 3176 T/C rs74126489 - 3'UTR
3227 .. 3227 A/G rs73027423 - 3'UTR
3483 .. 3483 G/C rs10912717 - 3'UTR
3553 ^ 3554 -/C rs34138445 - 3'UTR
3586 .. 3586 T/C rs73027415 - 3'UTR
3654 .. 3654 A/G rs79011787 - 3'UTR
3713 .. 3713 T/C rs10798302 - 3'UTR
3735 .. 3735 G/A rs112430365 - 3'UTR
3892 .. 3892 T/G rs116676418 - 3'UTR
3939 .. 3939 A/G rs72711437 - 3'UTR
4051 .. 4051 T/A rs12562588 - 3'UTR
4058 .. 4058 C/A rs116281061 - 3'UTR
4348 .. 4348 G/A rs61826823 - 3'UTR
4444 .. 4444 A/G rs12120395 - 3'UTR
4469 .. 4469 T/A rs117622865 - 3'UTR
4474 ^ 4475 -/TATTA rs113452743 - 3'UTR
4518 .. 4518 C/A rs12122992 - 3'UTR
4563 .. 4563 T/- rs61239660 - 3'UTR
4569 .. 4569 T/G rs74126487 - 3'UTR
4570 .. 4570 T/G rs55733322 - 3'UTR
4588 .. 4588 T/G rs116412484 - 3'UTR
4751 .. 4751 G/A rs73027407 - 3'UTR
5038 .. 5038 T/A rs12060401 - 3'UTR
5497 .. 5497 A/C rs59846661 - 3'UTR
5854 .. 5854 G/A rs1133673 + 3'UTR
5928 ^ 5929 -/A rs67675128 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
Location Variation Strand
194..208 (cgg)5 +
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
Type Start End Strand
AluSx1 1348 1644 -
MIR3 2875 2982 -
AluJr 4195 4432 -
L1MB5 4648 4857 -
AluJr 5815 5929 +
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer