H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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H-Invitational ID: HIT000000192 Accession number: AB007944 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Glycosaminoglycan xylosylkinase precursor.

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Transcript original information Accession number AB007944.1 CAGE tag ID NA EST ID NA Clone Number HH0451 Experimental resources   NBRC ; HGPD ; Antibody (FAM20B) ; Catalog (FAM20B); Sequence data provider Provider:KDRI;  Annotation project H-Invitational FLcDNA Length of cDNA 5983[bp] (No. of exon:8)[A:1690 T:1662 G:1404 C:1227] Devision HUM Molecular type mRNA Library origin Cell type NA Tissue type brain Develpmental stage NA

Sequence quality information CDS feature Complete CDS Kozak sequence NA PolyA NA Vector/adapter sequence NA Frame shift NA Remaining intron NA Splice site acceptor (NAGNAG) NA Transcript quality feature NA Notes NA

GTGTGGGACTGCCGCTCTGCGCGGCGAGAGGTGGCCTGGGAATGGCCGGG CCGGGGGTGGGCCGGAGCCGCTGTGGCGGCGGCGGCGGCTGGGGGCGGTG AGCGCGGCGTGGGGCTGCCCCTCCCCGGAGGCGGCGGGGGCGGCCGGGGC CGCGCCGCACCGCACCGCGCGGGCGGCCATGGAGCGAGCCTAGGGCCCGA CAGGAACTGTGGAAGGTGCATCAGTGAAGAAATGGACCAATGTGTATAAT CATGGAATCTCCTTGCTAACCATCACCACCAGCTCTCCTTAATACATGAG CAAGAGTGGGTCAGGGGAGAAGGAAAAGAGGTCAACATGAAGCTAAAGCA GCGAGTCGTGCTGTTAGCAATTCTCCTTGTCATTTTTATCTTCACCAAAG TTTTCCTGATTGACAACTTAGATACATCAGCTGCCAACCGGGAGGACCAG AGGGCCTTTCACCGAATGATGACTGGCTTGCGGGTGGAGCTGGCACCCAA GCTGGACCATACCTTGCAGTCTCCCTGGGAGATTGCAGCCCAGTGGGTGG TTCCCCGGGAAGTGTACCCTGAAGAGACACCAGAGCTGGGGGCAGTCATG CATGCCATGGCCACCAAGAAAATCATTAAAGCTGATGTGGGTTATAAAGG GACACAGCTGAAAGCCTTACTGATACTTGAAGGAGGCCAGAAAGTTGTTT TCAAACCTAAGCGGTATAGCCGAGACCATGTGGTGGAAGGGGAACCGTAT GCTGGTTATGATAGACACAATGCAGAGGTAGCAGCCTTTCACTTGGACAG GATTCTGGGTTTCCACCGAGCCCCCTTGGTAGTTGGCAGATTTGTTAATC TTCGGACAGAGATCAAACCTGTCGCCACAGAGCAGCTGTTGAGCACCTTC CTAACTGTAGGAAACAATACTTGTTTTTATGGGAAGTGCTATTACTGCCG AGAAACAGAACCAGCTTGTGCTGATGGAGACATAATGGAGGGATCTGTCA CACTTTGGCTTCCAGATGTGTGGCCTCTGCAGAAGCACCGTCACCCATGG GGCAGGACTTACCGAGAAGGCAAATTGGCCAGGTGGGAGTATGATGAGAG CTACTGTGATGCTGTGAAGAAAACGTCCCCTTATGACTCTGGCCCGCGCC TCTTGGACATCATTGACACAGCTGTCTTTGATTACCTGATTGGCAATGCT GACCGCCATCACTATGAGAGCTTTCAAGATGATGAAGGCGCTAGTATGCT CATCCTTCTTGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAAA GAAGCATTCTTGCCCCTCTCTATCAGTGTTGCATCATTCGGGTGTCCACC TGGAACAGACTGAACTACCTAAAGAATGGTGTGCTAAAGTCTGCCTTAAA ATCTGCCATGGCCCATGACCCCATCTCCCCAGTGCTCTCTGATCCTCATC TGGACGCCGTGGACCAGCGGCTCCTGAGTGTCCTGGCCACCGTGAAGCAG TGCACCGACCAGTTTGGGATGGACACAGTACTGGTGGAAGACAGGATGCC TCTCTCACACTTGTAATTCTCGACACAAAATAAGTGAAACTTCTTTTTAC AAAGATAGAGAAACAGCACAATCAATTCCAAATGGTATGAGATGGATTGG AAGTGGCCAGCAGCAAGTTCTGGTGACAGGACAGGGTGGCCTTGGATGTC TTTGGTATTTTCTGTAGTAGAAACTAAAGCAAAGACCACAAGTTTCAGAG CATGGAGACATTCCTGCTGAATCGCCTTCTCACCTCCTCGGCAATTGCTC ATTCTAGGGTTGGGCATCATAGTTGGTCAGTCTTAATTCCCATGCCAAAG GACAAACAGGTGTGACATTTGGATAGATGAATACTGGGATTGGCTCTGGA GCATGTGTTTTGAGTTGAACCTTGCAGTCCTTTCTCTACGCCCGTGGATT TTGTGGAAACACTTTGCAATCTCTTTGTCTTTTTTTTTTTACCAGAACTA GTTACATTGGAATGCTTACTGTCCTACAGAGTGGCAGCAAATAAAACCTT GCATTCCATCAAGCCAAAATAGCACACTCTGTTAGAGGAGATACATGTTT AAGATAGAATTGGAGGGAAGGACAAAAACAGAAAAATGTTTGGGCTTTTA AGCCATTGGGTAGTATTGTTTTGATGATCTTAGAGGAGGGAAGAAGAGAG AGAGACCCAATGGTAGAACCAGAATCAGGGAGATGACTGAACTACTGAAA AACAGGTTCCCTTGTATTTAGGATCTTAAGGTGTATAAAAAGCAAACATG ACTTTGCACCTAAGTAAATTCTGCATTCTCATAGTTGTGTCCCAATTAAC CAAAAAGTTGTCTCTAGAGAAAATAATATTACAATCTAAGCATGATTCTC TGTGGAGACTAATTTTTTCCCCTTTTGCCAAAAGCAGTCCTTCCCAAATT AACAAAGCAAACTGAAATAATACCTTGAATAACAGGTTGCCTGTGGTCTC TGTCATCCTCGTCTCTCTTCTGAAATGAATTTCCACCTCTGCCTTTAAGG CATTTTTGTCACTGAAGCTGCTGTTCCCAAGAGATAGGCAACCTTTTTGT CCCTTTCTCATAAGAAAGGGACACTCCTACAGGTGAGAGTGTATACCTTA CTCTCTCAGATAAGTGGCTGGACTTATCTTGTGATTTGGGGCCATGGAAG ATTGGAAACAAAGATTTTAAGCCTTCTTCTTTTTTGCTTTTTTCTTTTTT TTTTGAGACCAAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCACG ATCTTGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTCTTGC CTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCGCCATCGTGCCCAGC TAATTTTTATATTTTTAGTGGAGACAGGGTTTCGGGTTTCACCATGTTGG CCAGGTTGATCTTGGACTCCTGACCCCAGGTGATCCACCTGCCTCAGCCT TCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGGCCGGCCAAGATTT TAAGCCTTCTGAGCCTTGAAATTGAGGAGGTTAAAAGGAAGAGCCTTAAG ATTTTGATTTATGTCAAATCCTAATTCTATCATTCAGTCTTGTTTGGAGT TCTGAACCCATGATGTTGTATTATGCTTCTTTCTCCTCTTAGCACTCTCA AATTTCAGGTTTGTAAAACACAGTTTTTGTTTTGTGTTCTGGCAAAGTGA TCTCAACATGTAAGTAGTTGCAGTAAAACACAGGGGCAAAGGAAGACAGG CCTGATGTGCCCACTCATCTATGGACTCAGAGCTGTGTGCTTTGCTCCTG CATCTTGTTGAGGTGCTGTTCCAGCTTTGCATTTCTGTCAAGTAGAGGCG AATATATAAACAGTGTGGTTGAATACATTTAATGCCAGCCATTGGAAACT AGTTTTAGGCAACCACTCTCAAAAACAGCTTTAGAATTTATGCCCAGTTT TCTTGCATTGAAAGATAACTGAGTAATAACCTGTAACTATTTTTAAATGG CATGAAATTAGGAAACTTTTGTACATTTTATATACATTTTGAGATGAACA GAACAATGGGCTGAGTTATAAAAAGCGTGTATTGAATTTAAGAAGACAGA CTAGCACAAAACACAGAATTCGTGTTAACCAAAGGAGGCATTGATTTCAG TTTTAAGGCTACTCAGTGTTGTGTGTCCAGGGAAATTCACAGCTCAGTAT GAGAATACCTTGGTTAGTGCTCACCCACAAGCTTCCAGGAGCCAGCTGGG AGGAGACAATAGGAAGAGATGTCAGCTCTGCTCTCCCTGTAAATGTTAGT TGAACTAAGTTATGGATTTGTGGTCTTTCAAATACATGACGCCTTTAGTA TGCCACACTGAAATGAATAAGAAGTCTTCTGAAACTGGGAACTTCATAAC ATTGAAGGCAGAAGATTCTGCTAAGGAAAAAAGCAGGCAGGAAAGAAAAT GTCTCATCCTTTCTTGAAAGCATTTGCAGAAAATATATCATTTCATTTTA TTCCCATCTGTTTTCAAACTCGTGATCTTAAAAGGCATTCTGATGATAAA TTTAGAATTTTCATCTATAAAATTTAGAACTCTAATCCATAAAGTTAGAA TTGAGCTAATAGAGTGGTATGACATGGCACTAAAAATATAAATTTTTGTT GTAAGTCAGGATTGGAGTAAGCTGGAAAAGTATGTTTAGGCAAATCTTGG AGAAAACCAACCATAAACTTACAGCTCTAAAATTCAGAAAGCCCTAAAAT TTCAAACACTGTTTGAAAGAAGAGGTGGGGGCCGGGTGCCGTGGCTCATG CCTGTCATCCCAGCATTTGGGAGGCTGAGGCAGGCAGATCACCTGAGGCC AGGAGTTCGAGACCAGCCTGGCTGGCTAGCATGGTGAGACCGTCTCTACT AAAAATGCAAAAATTAACAGGGCACGGTGGCATGCGCCTGTAGTCCCAGC TACTCGGGAGGCTGAGGCAGGAGAATCACTTGAATCCAGGAGGCGAAGGT TGCAGTGAGCTGAGATTGTGCTGCTGCACTCCAGCCTGGGAGACAGAGCG AGACTCTGTCTTAAAAAAAAAAAAAGGAGGTGAATTTTTTTTTAAGTTTT GTAACACTGTCCTACTTTATTTATTAGAATCTAAGGCTGTTACAATCAAG TCGTTGCAGGGTTTGGATCAGCTGTAAGTTAGGTATGCCTACCAAACATC CAAAGGTAGACGTGGAGACATTTTAATACTACAAAACTAGGAAAATCAGA ACTCATGGCCATTTCCTGCCCTCCTCCAACTTGTTAAAACATGTTTATTC TAAAGTTCGAATGGATAAATTTGAGTATAAAGGTTTTGTTATAAAACTGT TCTTTAGTGTAAGGCTGCATTGTGGGTTTGGGGGAAATGTAAATAATTTT CTGTGTAAAACAAATTCATAGGATCTGATTTGCTCAGAGTATTATTCAAG AATGTATTAATAAGGCATTGCCCCCTGTTTGCACTCAGGGTTAATATGTC AAATGAAATTTAAGAAGGAAATGGAAGAATTCAGGTACATTAATTGCATA TTATTTTGGGAAAGATGAGTCCTATACGTGGCAATTTTTCAATGTCATCT GAAGCCAGCATTATCTTCCAAAGAAATCGATCTTTTTTTTCTAAAAAAAA AAAATGCTTTTGCCTTCCCTTCCCTTCCCATCCGCCATATTTCTTCAGCC TTTCTTCTCGATCACCCGTGTATTCTTTGACCAGTAAATGACCACACCTC AATGATGGTAAAACAGCATCATCAGTAAGCTATCTTATATGCCTCATCCT GTGAGTTTGAGCTTCAGGAAACATGAGTAAAAGTATATGTAATGTATATA GTCGTATATGTATTCTAGCAAGAAAAACATATTTATTTTGACAAAGGGGA ACACTGACTTTCTGAAGGATTCAGAAAGAACCTTAGTGAAAGGTTCTCAG TCTCTGAGAGTGGACCCTAATTAACATAAAGACCATTCATCAGCGAATAA CTACTGAGCAACTCTAGTGTGCCAGCACAGGCCAGACATACTAGTGAGCC AGGCACATCTGGCCTTGGGAAACTCATCCTACAGGGGAAGGCCAGTTTTT TTCCCTTCAATTCCTCAAGTCTGGGTGGTGACAAGGTAGGGGCTAGGTAC TGGACTACCACAGGTTTTTAGGAACTAAGGTGTTTCTCATAAACACAAAA TGTTGGGTGAAACTGGGAACAACTACTCAGAAGCTCATTTATTTGCTTAA ATGGAAAGTGTGGGAGCCACTACCCTCTCTTTTGATCTGCCAAGGATTTC CTCTCAGAGCTGTTGCACAGACAGAGATTGTACTTGGTAAGATACCAAAC AAGACAGATATGGATCTAAATTTCTAATGTGTTCTATGGGTTTCAATTCT GAAAAAAGAAAATGAATAAAGATTTTAATAAAT

Gene structure information

H-Inv cluster ID		HIX0001372
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178995031- 179045697
	Strand	+
Possible duplicated location(s)		NA
Gene structure		8 exon(s)
Database links	RefSeq	NM_014864;
	Ensembl	ENST00000263733;  ENST00000440702;
	Entrez Gene	Entrez Gene ID:9917;
	KEGG GENES	KEGG GENES(9917);
	GeneCard	FAM20B;  *GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome alignment;

Predicted CDS information HIP ID HIP000068238 Predicted CDS 337..1566;  409[aa];  Orientation:+1;  Codon Adaptation Index (CAI). 0.768 Database links RefSeq NP_055679;  UniProt O75063;  CCDS CCDS1328;

MKLKQRVVLLAILLVIFIFTKVFLIDNLDTSAANREDQRAFHRMMTGLRV ELAPKLDHTLQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKAD VGYKGTQLKALLILEGGQKVVFKPKRYSRDHVVEGEPYAGYDRHNAEVAA FHLDRILGFHRAPLVVGRFVNLRTEIKPVATEQLLSTFLTVGNNTCFYGK CYYCRETEPACADGDIMEGSVTLWLPDVWPLQKHRHPWGRTYREGKLARW EYDESYCDAVKKTSPYDSGPRLLDIIDTAVFDYLIGNADRHHYESFQDDE GASMLILLDNAKSFGNPSLDERSILAPLYQCCIIRVSTWNRLNYLKNGVL KSALKSAMAHDPISPVLSDPHLDAVDQRLLSVLATVKQCTDQFGMDTVLV EDRMPLSHL*

Motif information

	a.a. length	InterPro	Name
	384	IPR009581	Protein of unknown function DUF1193 [Family]

Gene function information

H-Inv ID		HIT000000192
H-Inv cluster ID		HIX0001372
Accession number		AB007944.1
CAGE tag ID		NA
EST ID		NA
Transcript feature		Representative transcript;
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Experimental evidence		Protein evidence
PubMed ID		NA
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
	DDBJ	KIAA0475
	UniProt	NA
EC number		NA
GGDB (GlycoGene Database)	Gene symbol	NA
	Familly	NA
	Designation	NA
	Expression	NA
KEGG metabolic pathway		NA
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000068238
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NM_014864;
	Ensembl	ENST00000263733;  ENST00000440702;
	Entrez Gene	Entrez Gene ID:9917;
	KEGG GENES	KEGG GENES(9917);
	GeneCard	FAM20B;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Curation status		Human curated
Notes		NA
Related H-InvDB links		Gene family;  Similarity Search Tool;  TACT;

fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.

NA

Subcellular localization information

Last modified:20-Apr-2012

WoLF PSORT	extracellular;  golgi apparatus;  lysosome;  Other;
Target P	signal peptide
SOSUI	membrane protein
TMHMM	membrane protein
PTS1	Targeted
Related H-InvDB links	LIFEdb;  JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Gene expression information

Last modified:20-Apr-2012

Tissue-specific expression			NA
Probe information	AceGene		AGhsA250414;
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	202915_s_at;  202916_s_at;
		HG-U133A	202915_s_at;  202916_s_at;
		HG-U133A_2	202915_s_at;  202916_s_at;
		HG-U133B	NA
		HG-U133_Plus_2	202915_s_at;  202916_s_at;
		HG-U95	35318_at;
		HG-U95A	35318_at;
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	2369465;  2369469;  2369470;  2369471;  2369472;  2369474;  2369475;  2369477;  2369479;  2369480;  2369481;  2446036;  2446038;  2651759;  4026876;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	A_23_P103923;
		Whole Human Genome Oligo Microarray:PGID247	A_23_P103923;  A_24_P148043;  A_24_P160649;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:20-Apr-2012

Disease relation		Disease name:NA
Related information in OMIM		OMIM ID:NA Title:NA
Co-localized orphan diseases		OMIM ID:  115665;  116600;  155600;  600975;  605225;  605606;  606788;  606852;  606928;  607317;  607671;  608543;  608553;  608995;  610320;  612367;  612596;
Disease related mutation		NA
Literature-Extracted GENe-Disease Associations (LEGENDA)	Gene name	Entrez Gene ID:(9917)
	Disease	Entrez Gene ID:(9917)
	Substance	Entrez Gene ID:(9917)
Related H-InvDB links		DiseaseInfo Viewer;  LEGENDA;

Evolutionary information

Last modified:20-Apr-2012

Relationship	Species	Accession number	MGI	Links
Orthology	Gallus sp. (Chicken)	AJ720888		G-integra
Orthology	Mus sp. (Mouse)	BC023737	MGI:2443990	G-integra
Orthology	Danio sp. (Zebrafish)	BC115339		G-integra
Orthology	Bos sp. (Cow)	ENSBTAT00000018604		G-integra
Orthology	Canis sp. (Dog)	ENSCAFT00000022098		G-integra
Orthology	Monodelphis sp. (Opossum)	ENSMODT00000007653		G-integra
Orthology	Oryzias sp. (Medaka)	ENSORLT00000018248		G-integra
Orthology	Pongo sp. (Orangutan)	ENSPPYT00000000557		G-integra
Orthology	Tetraodon sp. (Tetraodon)	GSTENT00020514001		G-integra
Orthology	Takifugu sp. (Fugu)	NM_001048041		G-integra
Orthology	Rattus sp. (Rat)	XM_001068245		G-integra
Orthology	Macaca sp. (Macaque)	XM_001115532		G-integra
Orthology	Equus sp. (Horse)	XM_001916737		G-integra
Orthology	Pan sp. (Chimpanzee)	XM_514027		G-integra

Phylogenetic tree [View by ATV]	Neighbor-joining (phb)
Related H-InvDB links	Evola;  dN/dS (under constraction);

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Single Nucleotide Polymorphism (SNP) and indel  Location Variation dbSNP ID Strand CDS/UTR Translation 301 .. 301 C/G rs72707294 + 5'UTR 316 .. 316 G/A rs111851052 + 5'UTR 558 .. 558 G/A rs11802142 + CDS Synonymous[Arg74Arg] 747 .. 747 G/A rs61731084 + CDS Synonymous[Pro137Pro] 975 .. 975 T/G rs115005196 + CDS Nonsynonymous[Asp213Glu] 1424 .. 1424 T/C rs112282462 + CDS Nonsynonymous[Ile363Thr] 1597 .. 1597 T/C rs73045635 + 3'UTR 1678 .. 1678 A/G rs4456058 + 3'UTR 1685 .. 1685 G/A rs2025584 - 3'UTR 1988 .. 1988 T/- rs11299711 + 3'UTR 1990 .. 1990 T/- rs58197730 + 3'UTR 2047 .. 2047 C/A rs77755493 + 3'UTR 2114 .. 2114 A/G rs115929400 + 3'UTR 2140 .. 2140 T/C rs112020970 + 3'UTR 2227 ^ 2228 -/G rs34534731 + 3'UTR 2256 .. 2256 G/T rs9726948 + 3'UTR 2376 .. 2376 A/C rs116234027 + 3'UTR 2378 .. 2378 A/G rs16853612 + 3'UTR 2513 .. 2513 C/T rs9725887 + 3'UTR 2556 .. 2556 T/C rs9725888 + 3'UTR 2586 .. 2586 A/C rs4652352 + 3'UTR 2602 .. 2602 C/T rs72709441 + 3'UTR 2625 ^ 2626 -/C rs35222556 + 3'UTR 2736 .. 2736 G/T rs4652353 + 3'UTR 2744 .. 2744 C/T rs114807247 + 3'UTR 2746 .. 2746 T/C rs34488634 + 3'UTR 2810 .. 2810 C/T rs4652354 + 3'UTR 3198 .. 3198 T/G rs79542318 + 3'UTR 3267 .. 3267 G/C rs56006430 + 3'UTR 3297 .. 3297 C/A rs9730439 + 3'UTR 3825 .. 3825 G/T/C/A rs3766626 - 3'UTR 3834 ^ 3835 -/C rs35980145 + 3'UTR 3839 .. 3839 G/A rs3766625 - 3'UTR 4225 .. 4225 G/A rs16853619 + 3'UTR 4469 ^ 4470 -/G rs35292643 + 3'UTR 4486 .. 4486 G/C rs116023119 + 3'UTR 4588 .. 4588 G/A rs2018786 + 3'UTR 4692 .. 4692 A/T rs74837593 + 3'UTR 4858 .. 4858 C/T rs78609757 + 3'UTR 4985 .. 4985 C/T rs115052587 + 3'UTR 4991 .. 4991 A/G rs76363748 + 3'UTR 5009 .. 5009 A/G rs16853621 + 3'UTR 5089 .. 5089 A/T rs80245804 + 3'UTR 5291 .. 5291 A/G rs2147768 - 3'UTR 5641 .. 5641 G/C rs61823795 + 3'UTR 5643 .. 5643 C/T rs61823796 + 3'UTR 5653 ^ 5654 -/T rs71700716 + 3'UTR 5759 .. 5759 G/A rs9249 + 3'UTR 5768 .. 5768 A/C rs115640057 + 3'UTR 5772 .. 5772 A/G rs117216397 + 3'UTR 5779 .. 5779 A/C rs116166770 + 3'UTR 5786 .. 5786 C/A rs1220 + 3'UTR 5834 .. 5834 G/T rs11540488 - 3'UTR 5838 .. 5838 T/A rs15325 + 3'UTR  Microsatellite (Short Tandem Repeat, STR) Location Variation Strand 75..89 (ggc)5 +  Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD) No data available

Repeat  Type Start End Strand AluSx1 2727 3043 - AluSx 4330 4625 + Database links Human-Gene diversity Of Life-style related Diseases(H-GOLD);  Related H-InvDB links VaryGene;  Repeat Mask Viewer;