H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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Locus view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS

H-Invitational ID: HIT000000190 Accession number: AB007942 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Similar to Uncharacterized protein; Fragment;

		Select format Flat file XML file Nucleotide sequence fasta Protein sequence fasta

Transcript original information Accession number AB007942.1 CAGE tag ID NA EST ID NA Clone Number HH0220 Experimental resources   NBRC ; HGPD ; Antibody (DNAJC6) ; Catalog (DNAJC6); Sequence data provider Provider:KDRI;  Annotation project H-Invitational FLcDNA Length of cDNA 5747[bp] (No. of exon:19)[A:1720 T:1597 G:1199 C:1231] Devision HUM Molecular type mRNA Library origin Cell type NA Tissue type brain Develpmental stage NA

Sequence quality information CDS feature Complete CDS Kozak sequence NA PolyA NA Vector/adapter sequence NA Frame shift NA Remaining intron NA Splice site acceptor (NAGNAG) CAGAAG;  CAGGAG;  Transcript quality feature NA Notes NA

CGCACACCGACTTGCATGCAATTATCATAGCCCGAGTGCTCCTCCGTTGA GAGACTTCGCCCCCGAGACCGCTGACTGTGAATGACAAATCAAAAGTCAG GGTTGCAGAATCAGCCGGACTTTCCTGCTCATTTGCAGCAGAGGGAGGAA GCAGAGAATGAAAGATTCTGAAAATAAAGGTGCCTCATCTCCAGACATGG AGCCCAGCTATGGGGGAGGTCTCTTTGACATGGTAAAAGGAGGTGCAGGG AGGCTCTTTAGTAACCTAAAGGACAACTTGAAAGACACCCTCAAAGACAC ATCTTCTAGAGTGATACAATCTGTGACCAGCTACACAAAGGGAGATTTAG ACTTCACTTATGTTACCTCCAGAATTATTGTGATGTCCTTTCCTCTGGAC AATGTTGACATAGGATTCAGGAATCAGGTTGATGACATTCGAAGCTTTTT GGATTCCAGACATCTTGACCACTACACAGTATACAATCTGTCACCTAAGT CTTATCGAACTGCCAAGTTTCACAGCCGGGTCTCAGAATGCAGTTGGCCC ATTAGGCAGGCTCCCAGTCTGCACAACCTTTTTGCTGTGTGTCGGAATAT GTATAACTGGCTACTGCAGAATCCCAAAAATGTCTGTGTTGTCCACTGCT TGGATGGACGGGCGGCATCATCAATTCTGGTTGGTGCTATGTTCATTTTC TGTAATCTCTACTCTACTCCTGGCCCAGCCATTCGATTGCTATATGCAAA GCGACCAGGAATTGGACTTTCACCATCCCATAGGAGATACCTGGGCTATA TGTGTGACCTACTGGCAGACAAGCCCTACCGCCCTCACTTCAAGCCTCTC ACAATTAAGTCGATCACTGTCAGTCCAATACCCTTTTTCAACAAACAGAG GAATGGATGTCGCCCTTACTGTGATGTACTCATTGGAGAAACCAAAATAT ATTCGACTTGCACAGATTTTGAACGAATGAAAGAATATCGTGTCCAAGAT GGAAAAATCTTCATTCCCTTGAACATCACTGTGCAAGGAGACGTGGTTGT TTCCATGTATCACTTGAGGTCAACCATTGGGAGCCGGCTACAGGCTAAGG TGACCAACACACAGATATTCCAGCTTCAGTTTCACACTGGATTCATACCA CTGGACACAACAGTTTTAAAGTTCACCAAGCCTGAGTTAGATGCATGTGA TGTACCAGAAAAATATCCTCAGCTATTTCAGGTGACACTGGATGTAGAAC TACAGCCCCATGACAAAGTAATAGACTTAACTCCACCATGGGAACATTAC TGCACAAAAGATGTCAATCCCAGCATCCTCTTCTCTTCTCACCAGGAACA TCAAGATACGCTGGCCTTAGGAGGACAGGCTCCAATAGATATCCCTCCAG ACAACCCCAGGCATTACGGACAAAGTGGTTTCTTTGCCTCTCTCTGTTGG CAAGATCAGAAATCGGAGAAGTCATTCTGTGAGGAAGACCACGCTGCCCT AGTGAATCAGGAAAGTGAGCAATCAGATGATGAACTTCTGACACTTTCCA GTCCGCATGGCAATGCCAATGGTGACAAGCCTCATGGAGTCAAGAAGCCC AGCAAAAAGCAGCAGGAGCCAGCAGCCCCTCCACCCCCTGAGGATGTGGA CCTTTTGGGCCTGGAAGGGTCTGCAATGAGTAACAGCTTCTCTCCGCCAG CGGCTCCTCCCACCAATTCTGAACTACTGAGTGACCTGTTTGGGGGTGGA GGTGCAGCTGGTCCCACCCAGGCTGGACAGTCAGGAGTGGAAGATGTGTT TCATCCTAGTGGACCTGCGTCTACCCAGTCAACACCACGCCGCTCTGCCA CCTCCACCTCTGCGTCTCCAACCCTAAGAGTGGGAGAAGGTGCCACCTTT GACCCATTTGGAGCACCTTCTAAACCATCAGGTCAGGATTTGCTGGGTTC TTTTCTGAACACATCCAGTGCTTCCAGTGACCCCTTTCTCCAGCCCACAA GAAGTCCTTCGCCCACAGTACATGCTTCTAGTACGCCTGCTGTGAACATT CAGCCAGATGTTTCTGGAGGTTGGGACTGGCATGCTAAACCAGGAGGCTT TGGAATGGGAAGCAAGTCAGCTGCCACCAGCCCAACCGGATCCTCGCATG GTACTCCCACCCATCAAAGCAAACCCCAGACTCTGGATCCTTTTGCCGAC CTTGGGACACTAGGTAGTTCTTCCTTTGCCAGCAAACCCACCACACCAAC TGGATTGGGTGGAGGATTCCCGCCTCTCAGCTCGCCACAGAAGGCGTCTC CCCAGCCTATGGGTGGCGGGTGGCAGCAGGGAGGTGCCTACAACTGGCAG CAGCCACAGCCTAAGCCTCAGCCCAGCATGCCCCACTCCTCTCCCCAGAA CCGACCCAACTACAACGTGAGCTTCTCAGCCATGCCTGGGGGCCAGAACG AACGTGGGAAAGGATCAAGTAATTTGGAAGGGAAACAAAAAGCAGCTGAT TTTGAAGACCTACTCTCTGGTCAAGGTTTCAATGCTCACAAAGACAAAAA GGGGCCTCGGACAATAGCTGAGATGAGAAAGGAGGAAATGGCCAAGGAAA TGGATCCTGAGAAATTAAAGATTCTGGAATGGATTGAAGGCAAAGAAAGA AATATCAGAGCCCTTCTTTCCACGATGCATACCGTACTATGGGCTGGGGA GACCAAGTGGAAACCAGTTGGCATGGCAGACCTGGTAACACCAGAGCAGG TGAAGAAGGTGTACAGGAAGGCTGTCCTGGTGGTGCACCCAGATAAAGCT ACTGGGCAACCCTATGAACAATACGCAAAGATGATTTTCATGGAGCTCAA TGATGCCTGGTCTGAATTTGAAAACCAAGGCCAAAAGCCCTTATATTAAT TTATGAGCTTTTCCATCTCTGCTGCAGACCTGTGCTAATGCTTAGTGTGT GTCACAATTCTGAGGTTTTCGCAGATGAACCAAAAACTCCAGTAACATGT TTTCAGTACTAAACCGTTAAGTTACTCATGAATTAATTTCTCATTGATAA GGAATGTGGATGTTTGGTTTCTCCAAAGTTCCCACCATAAAAGATCCAAA GCATGAGAGGAACTTCTAGTCAGATGACCTTGCAGAACCACCGCATTCCA CCCTGCCCTTTGGGGAGCCTACTCAGCATTCTACCTGGGGAAATGGAAAA CAGAGGCCACCACCCATGAAGGCATAACACCCATCACATTGTCTGAGAAT AGGATTAATGAGCAAAAGTTATGATAATAGAGTTATATGATGGTTTAATG GTTTCTAGATTTTTCTTGGAAAGATATAATTTGAGCAGTGGCTTTATGCA GACTCCAAGAACAAAACCACCAGGTATTTTTTTTTAAGTAAAAATTTACT AAGGCCTTTAGCATAATACTGTAAATGTCTTTTGGTCAAGAGGACTAACA AATATAAAGGAACTTGAAATGTGGGGAGTGATAATAGTCCAGTGATTAAA CTACAGTCCAGTGATTACCACCAACTTTCTGACTAAGCTAAAAATGAATG AAAATGGTGGCTAAAGAAAATAGGGACTCTGAAGACGTCGAAATCTTTAT TCCTGGTTAGGAAGGTGGGCCGCTACCCTTCTTTCCCTTTAGAAAACTGT GATTAATTAAATAAAAAGTCTTACTACTATAACAACTCTAAACCTGGTTT AAATGAAACATCTAATTTTGCTGTAAGGCTTAATGCTCTTCTTTTGTTTA GCCAAGAAAACATTCTTAGTTGGAAACAGGTGGTAAAGTAGTTTGGCCTG TTCACAACTTATCAGGACCAATATCTAGTGTGGACTCAGTGTTCTCTAGG TTTGTGAGCAGTTGTGGTAAGAGAATGGAAGGCAACACTGAATAGGAGTT AAGGGAATGGCACGATCACAGTGAGAGAGCTGCACTCACCTGCAGACCCA GTCAGATGGCTTGTCAGTATCTGCTCTGAGGAACCAGGTCCCACCTCCCC ACAAGGCAAATCTAGACCCATTAAATTATTACAGTGGGCTTTTTTGTTTT AAAAGTGGTTGGGGATCCACAGGAACGACATTCATACAGGGACATTTGTG AAAGCAAAGCAAGAATGAATGCTTTCCCGATCTCAGACTGGCTGGATTCA GATCAGTGTGTTGGCTGGTTCTCATTTTAAGGGGTAAGCAGTTTGCTATT CTGTGACTTTAGTAGATCTCTTTTGTGTGCACATATACAATGTGCATTAT ACATATATATTAAATATATCCACAAAGCAGATGGGCAAAAAGATTTTCAT GCTAATCTTCAAAGGTTCATGCTCAATATTGTGAAAAGCTTTTAAAAGTT GTTTTGAAAAGACAATCATTTTTTGTTTTTGTTTTAACTTTCTTGTGGCA AGCTATACCGGAAAAGCGGCATGTCAAAAATACTTTAGGTTCTACATAGA TCTCTTTCTCTCTTTTGTTTTGTTTGTTTGTTTGTTAAAGTTCATTATTT ATTTTACCTTTTACTGACAATGTGAAACTCGAAGAAAATGTTCTCTTTTT AAATATACAGTCATAAACTGTTCAAGGTAACCATAACAAACTAGGTGTTA TTTATTAACGTATTATAAAATAATGTTTGATCCAGTATGTGCTTGTCTTA TTTAAAATTGGAATGTGAGACATGTTGCTGTGACCTGTTTTTCTTTCTCA TTCACATTTGTAGATATTGTGTGAACTACAGTATATAATGATAACAATTA AAAGGATATTCTGTGGATGTCACGTATTTTGAAATGATAGAACTACATTA GCTTTGTATCATGTTTGGATAATTCATCAATGTTCACAGTTTAAAACATC ATTAAACATTATGTAATTACAATGAGAAAGAATCTTACTTAAATTTGGAG ATTTTCCCCCACATCTCTTTTCCGGATACATTATAATTCTGGACCCCTAT TTATCTCAAAACTCTTAATATATGCAGACCAACAGGTCTTTGCATTCCTT TTAAATAACTGGTTGTGACAAAGCTTGTTGTTGATCAGATTCACTGTTTC ATCATATTTATTGTAATATATTTTTTGTTTTGTAAATATGTTACAACAAA ATGTGATTGGTCTAAAATATTTGTAATGTATATTAAAAGGTTCAAAAATA TTTGTATAAATCTAAGTTATTTGGGTACTTGTAGGAATACAATGAGGAGC TTGAATGCCACCTTCTGACATGATTTACTTTTAAGGAAAGTTATGAGGAG AGAATACAAAAAGCATGCACCAAAATGTAATCTGACAGGATTTCTGGATT TATACGTAATCACTCCTGCCCCAACACACACACACACACACACACACACA CACACACACACACATGCACGCACACATGATTTTGATTATGCTACATGATA TATGTTTCAAAAAGAATTAGCATAGAAATCCTGGTCTCCTAGCCAAAAAA ATCAAAGGATTTTCAAAAAAACGAATCTGTATGTTGAGGCAAAAGGATTG AACCTGGAAGTCTGGGACTTTATCATAGAAACAAAGTCTCAGATATTTTA GTTCTTTGGAAACAAATGCTGTAATTCAAAAGCATTTGACCTGTCACTGT ACTATCTACATGTGGAAGAATGTTCAAGTTGAATCCTAATGCCGTGAATG AAACACAGTCTGTGTAGGGAATGAGCAAAAAAGTTGAATTCCAATTGCTT TTTGGCCTTTTGGCTAAAATAAATGTAGCATCTAATTTTATCAGTTT

Gene structure information

H-Inv cluster ID		HIX0000672
Genomic location	Chromosome	1
	Location	1p31.3
	Position	65730437- 65881552
	Strand	+
Possible duplicated location(s)		NA
Gene structure		19 exon(s)
Database links	RefSeq	NM_014787;
	Ensembl	ENST00000263441;  ENST00000371069;  ENST00000395325;  ENST00000463018;  ENST00000472787;  ENST00000483402;  ENST00000494710;  ENST00000498720;
	Entrez Gene	Entrez Gene ID:9829;
	KEGG GENES	KEGG GENES(9829);
	GeneCard	DNAJC6;  *GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome alignment;

Predicted CDS information HIP ID HIP000066517 Predicted CDS 158..2899;  913[aa];  Orientation:+2;  Codon Adaptation Index (CAI). 0.743 Database links RefSeq NP_055602;  UniProt O75061;  CCDS CCDS30739;

MKDSENKGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSS RVIQSVTSYTKGDLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDS RHLDHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYN WLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAIRLLYAKRP GIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSPIPFFNKQRNG CRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITVQGDVVVSM YHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACDVP EKYPQLFQVTLDVELQPHDKVIDLTPPWEHYCTKDVNPSILFSSHQEHQD TLALGGQAPIDIPPDNPRHYGQSGFFASLCWQDQKSEKSFCEEDHAALVN QESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLL GLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHP SGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFL NTSSASSDPFLQPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGM GSKSAATSPTGSSHGTPTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGL GGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSMPHSSPQNRP NYNVSFSAMPGGQNERGKGSSNLEGKQKAADFEDLLSGQGFNAHKDKKGP RTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETK WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDA WSEFENQGQKPLY*

Motif information

	a.a. length	InterPro	Name
	168	IPR014019	Phosphatase tensin type [Domain]
	142	IPR008973	C2 calcium/lipid-binding domain, CaLB [Domain]
	137	IPR014020	Tensin phosphatase, C2 domain [Domain]
	139	IPR014020	Tensin phosphatase, C2 domain [Domain]
	182	IPR001623	Heat shock protein DnaJ, N-terminal [Domain]
	127	IPR001623	Heat shock protein DnaJ, N-terminal [Domain]
	62	IPR001623	Heat shock protein DnaJ, N-terminal [Domain]
	65	IPR001623	Heat shock protein DnaJ, N-terminal [Domain]
	49	IPR001623	Heat shock protein DnaJ, N-terminal [Domain]

Gene function information

H-Inv ID		HIT000000190
H-Inv cluster ID		HIX0000672
Accession number		AB007942.1
CAGE tag ID		NA
EST ID		NA
Transcript feature		NO;  Splicing isoform
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein; Fragment;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (F1N1H3)  [Identity/coverage = 95.675%/99.31%] to Bos taurus (Bovine). protein.
Experimental evidence		Protein evidence
PubMed ID		19390049;  ALL;
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	DNAJC6
	HGNC aliases	NA
	HGNC name	DnaJ (Hsp40) homolog, subfamily C, member 6
	DDBJ	KIAA0473
	UniProt	DNAJC6
EC number		EC 3.1.3.48protein-tyrosine-phosphatase;
GGDB (GlycoGene Database)	Gene symbol	NA
	Familly	NA
	Designation	NA
	Expression	NA
KEGG metabolic pathway		04514 :Cell adhesion molecules (CAMs);  04520 :Adherens junction;  04630 :Jak-STAT signaling pathway;  04660 :T cell receptor signaling pathway;  04662 :B cell receptor signaling pathway;  04670 :Leukocyte transendothelial migration;  04910 :Insulin signaling pathway;  04920 :Adipocytokine signaling pathway;  04940 :Type I diabetes mellitus;  05120 :Epithelial cell signaling in Helicobacter pylori infection;
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000066517
	No. of interaction	5
	Interaction partner(s)	HIP000025839;  HIP000080656;  HIP000099143;  HIP000101253;  HIP000107553;
	BIND	NA
	DIP	NA
	MINT	MINT-66621;  MINT-8089088;
	HPRD	01559;  01733;  15476;
	IntAct	EBI-2827747;  EBI-2861541;  EBI-754372;  EBI-3505059;
Database links	RefSeq	NM_014787;
	Ensembl	ENST00000263441;  ENST00000371069;  ENST00000395325;  ENST00000463018;  ENST00000472787;  ENST00000483402;  ENST00000494710;  ENST00000498720;
	Entrez Gene	Entrez Gene ID:9829;
	KEGG GENES	KEGG GENES(9829);
	GeneCard	DNAJC6;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Curation status		Auto-annotated
Notes		NA
Related H-InvDB links		Gene family;  Similarity Search Tool;  TACT;

fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome.

NA

Gene ontology information

Molecular function	heat shock protein binding (GO:0031072);

Subcellular localization information

Last modified:20-Apr-2012

WoLF PSORT	nuclear;  cytosol;  golgi apparatus;  mitochondria;
Target P	Other
SOSUI	membrane protein
TMHMM	soluble protein
PTS1	Not targeted
Related H-InvDB links	LIFEdb;  JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Protein structure information (GTOP)

Last modified:20-Apr-2012

Start End PDB_ID E-value Identity Coverage SCOP_ID 77 212 1mkpA 2e-11 11.2 134/144 c.45.1.1 224 365 1d5rA1 5e-29 28.3 127/133 b.7.1.1 816 913 1nz6A 3e-22 95.9 98/98 a.2.3.1

Related H-InvDB links GTOP

Gene expression information

Last modified:20-Apr-2012

Tissue-specific expression			neural;
Probe information	AceGene		AGhsA111620;
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	204720_s_at;  204721_s_at;
		HG-U133A	204720_s_at;  204721_s_at;
		HG-U133A_2	204720_s_at;  204721_s_at;
		HG-U133B	NA
		HG-U133_Plus_2	204720_s_at;  204721_s_at;
		HG-U95	36022_at;
		HG-U95A	36022_at;
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	2340357;  2340377;  2340378;  2340379;  2340381;  2340384;  2340385;  2340386;  2340387;  2340388;  2340389;  2340390;  2340391;  2340392;  2340393;  2340394;  2340395;  2340396;  2340398;  2340399;  2340401;  2340402;  2340403;  2340404;  2340405;  2340406;  2416808;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	A_23_P95359;
		Whole Human Genome Oligo Microarray:PGID247	A_23_P147479;  A_23_P95359;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:20-Apr-2012

Disease relation		Disease name:NA
Related information in OMIM		OMIM ID:NA Title:NA
Co-localized orphan diseases		OMIM ID:  115665;  116600;  155600;  600975;  605225;  605606;  606788;  606852;  606928;  607317;  607671;  608543;  608553;  608995;  610320;  612367;  612596;
Disease related mutation		NA
Literature-Extracted GENe-Disease Associations (LEGENDA)	Gene name	Entrez Gene ID:(9829)
	Disease	Entrez Gene ID:(9829)
	Substance	Entrez Gene ID:(9829)
Related H-InvDB links		DiseaseInfo Viewer;  LEGENDA;

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Single Nucleotide Polymorphism (SNP) and indel  Location Variation dbSNP ID Strand CDS/UTR Translation 278 .. 278 T/C rs74486665 + CDS Synonymous[Leu41Leu] 383 .. 383 A/T rs61757223 + CDS Nonsynonymous[Met76Leu] 664 .. 664 G/A rs61753391 + CDS Synonymous[Ala169Ala] 1252 .. 1252 A/T rs61758427 + CDS Synonymous[Leu365Leu] 1442 .. 1442 C/T rs78141380 + CDS Nonsynonymous[Leu429Phe] 1486 .. 1486 A/G rs4325172 + CDS Synonymous[Glu443Glu] 1492 .. 1492 C/T rs11208644 + CDS Synonymous[His445His] 1676 ^ 1677 -/A rs35203656 + CDS 1696 .. 1696 G/A rs7551930 + CDS Synonymous[Pro513Pro] 1969 .. 1969 T/C rs12077111 + CDS Synonymous[Ser604Ser] 1996 .. 1996 C/A rs4582839 + CDS Synonymous[Pro613Pro] 2015 .. 2015 A/G rs77046530 + CDS Nonsynonymous[Thr620Ala] 2063 .. 2063 T/G rs76373786 + CDS Nonsynonymous[Ser636Ala] 2169 .. 2169 G/A rs4915691 + CDS Nonsynonymous[Ser671Asn] 2240 .. 2240 A/T rs113143702 + CDS Nonsynonymous[Thr695Ser] 2268 .. 2268 T/C rs77014468 + CDS Nonsynonymous[Phe704Ser] 2296 .. 2296 G/A rs113490907 + CDS Synonymous[Ala713Ala] 2437 .. 2437 T/G rs61733018 + CDS Synonymous[Pro760Pro] 3073 .. 3073 C/T rs9436293 + 3'UTR 3289 .. 3289 G/C rs112072071 + 3'UTR 3443 .. 3443 G/A rs10493377 + 3'UTR 3453 .. 3453 T/C rs75507639 + 3'UTR 3504 .. 3504 C/T rs9436732 + 3'UTR 3522 .. 3522 C/A rs11543262 + 3'UTR 3628 .. 3628 C/T rs114307796 + 3'UTR 3679 .. 3679 A/C rs12093960 + 3'UTR 3763 .. 3763 T/C rs77682017 + 3'UTR 3868 .. 3868 T/A rs9436733 + 3'UTR 3977 .. 3977 T/G rs41296144 + 3'UTR 4045 .. 4045 T/G rs41311152 + 3'UTR 4129 .. 4129 G/A rs114538485 + 3'UTR 4439 .. 4439 G/A rs41301082 + 3'UTR 4658 .. 4658 T/C rs112287683 + 3'UTR 5030 .. 5030 G/A rs1801792 + 3'UTR 5328 ^ 5329 -/AC rs68183979 + 3'UTR 5328 .. 5337 ACACACACAC/- rs111417975 + 3'UTR 5336 ^ 5337 -/AC rs71798235 + 3'UTR 5354 ^ 5355 -/AC rs72256996 + 3'UTR 5356 ^ 5357 -/AC/ACAC rs68089849 + 3'UTR 5364 ^ 5365 -/CA rs56339051 + 3'UTR 5365 ^ 5366 -/CA rs72296234 + 3'UTR 5369 .. 5369 C/T rs115102780 + 3'UTR  Microsatellite (Short Tandem Repeat, STR) Location Variation Strand 5324..5363 (ac)20 +  Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD) No data available

Repeat  Type Start End Strand U2 5694 5747 + Database links Human-Gene diversity Of Life-style related Diseases(H-GOLD);  Related H-InvDB links VaryGene;  Repeat Mask Viewer;