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H-Invitational ID: HIT000000180 Accession number: AB007932 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Plexin-A2; Semaphorin receptor OCT; Precursor;
 
 

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
90 .. 90 C/G rs58657209 - 5'UTR
208 .. 208 G/A rs4844415 - CDS Nonsynonymous[Ser15Asn]
223 .. 223 G/A rs2782948 + CDS Nonsynonymous[Arg20Gln]
296 .. 296 C/T rs139744523 - CDS Synonymous[Ala44Ala]
300 .. 300 C/T rs149664316 - CDS Nonsynonymous[Pro46Ser]
346 .. 346 G/A rs76008312 - CDS Nonsynonymous[Arg61His]
353 .. 353 G/A rs201533157 - CDS AA-STOP[Trp63*]
356 .. 356 C/T rs117987880 - CDS Synonymous[Thr64Thr]
379 .. 379 A/G rs11119014 - CDS Nonsynonymous[Gln72Arg]
392 .. 392 C/T rs12120681 - CDS Synonymous[Ala76Ala]
393 .. 393 G/A rs150210905 - CDS Nonsynonymous[Val77Ile]
407 .. 407 C/T rs35598508 + CDS Synonymous[Ala81Ala]
408 .. 408 A/G rs147839768 - CDS Nonsynonymous[Ile82Val]
415 .. 415 G/A rs148604381 - CDS Nonsynonymous[Arg84Gln]
443 .. 443 C/T rs73082013 - CDS Synonymous[Thr93Thr]
450 .. 450 G/T rs79601528 - CDS Nonsynonymous[Val96Leu]
454 .. 454 C/T rs201889146 - CDS Nonsynonymous[Ala97Val]
497 .. 497 G/T rs148386352 - CDS Synonymous[Pro111Pro]
498 .. 498 C/G rs143885355 - CDS Nonsynonymous[Pro112Ala]
522 .. 522 G/A rs147064862 - CDS Nonsynonymous[Glu120Lys]
574 .. 574 C/A rs142871447 - CDS Nonsynonymous[Ser137Tyr]
577 .. 577 A/C rs140874108 - CDS Nonsynonymous[Glu138Ala]
675 .. 675 G/C rs142508192 - CDS Nonsynonymous[Glu171Gln]
690 .. 690 A/G rs199587642 - CDS Nonsynonymous[Ser176Gly]
730 .. 730 G/A rs146682244 - CDS Nonsynonymous[Arg189His]
732 .. 732 T/C rs139661983 - CDS Nonsynonymous[Ser190Pro]
765 .. 765 A/G rs200743147 - CDS Nonsynonymous[Thr201Ala]
823 .. 823 G/A rs149833033 - CDS Nonsynonymous[Arg220Gln]
849 .. 849 G/A rs150703572 - CDS Nonsynonymous[Asp229Asn]
912 .. 912 C/T rs138299553 - CDS Synonymous[Leu250Leu]
945 .. 945 G/A rs143125665 - CDS Nonsynonymous[Gly261Ser]
961 .. 961 G/T rs143119210 - CDS Nonsynonymous[Gly266Val]
990 .. 990 G/C rs200909289 - CDS Nonsynonymous[Glu276Gln]
997 .. 997 C/- rs34826215 - CDS
1002 .. 1002 G/T rs181787622 - CDS Nonsynonymous[Gly280Cys]
1005 .. 1005 G/A rs138081202 - CDS Nonsynonymous[Val281Met]
1006 .. 1006 T/- rs35574844 - CDS
1008 .. 1008 G/A rs3748735 - CDS Nonsynonymous[Ala282Thr]
1019 .. 1019 C/T rs142400342 - CDS Synonymous[Ser285Ser]
1049 .. 1049 C/A rs201134624 - CDS Synonymous[Ile295Ile]
1062 .. 1062 A/G rs144365538 - CDS Nonsynonymous[Lys300Glu]
1091 .. 1091 G/C rs139833440 - CDS Synonymous[Val309Val]
1104 .. 1104 G/A rs201815135 - CDS Nonsynonymous[Gly314Ser]
1113 .. 1113 C/T rs143028527 - CDS Nonsynonymous[Arg317Trp]
1119 .. 1119 G/A rs150651173 - CDS Nonsynonymous[Gly319Arg]
1205 .. 1205 C/T rs138609776 - CDS Synonymous[Asp347Asp]
1221 .. 1221 A/G rs150144401 - CDS Nonsynonymous[Ile353Val]
1256 .. 1256 G/A rs141719903 - CDS Synonymous[Pro364Pro]
1260 .. 1260 G/A rs200228152 - CDS Nonsynonymous[Asp366Asn]
1290 .. 1290 C/T rs202043088 - CDS Nonsynonymous[Arg376Trp]
1291 .. 1291 G/A rs200774108 - CDS Nonsynonymous[Arg376Gln]
1315 .. 1315 G/A rs4844658 - CDS Nonsynonymous[Gly384Glu]
1319 .. 1319 C/G rs201059045 - CDS Synonymous[Arg385Arg]
1322 .. 1322 A/G rs4844657 - CDS Synonymous[Leu386Leu]
1341 .. 1341 G/A rs144926586 - CDS Nonsynonymous[Glu393Lys]
1391 .. 1391 C/G rs1664227 - CDS Synonymous[Thr409Thr]
1403 .. 1403 C/A rs184358108 - CDS Synonymous[Val413Val]
1406 .. 1406 C/T rs147969150 - CDS Synonymous[Pro414Pro]
1453 .. 1453 G/A rs192830917 - CDS Nonsynonymous[Gly430Asp]
1454 .. 1454 C/T rs144260713 - CDS Synonymous[Gly430Gly]
1457 .. 1457 A/G rs139127977 - CDS Synonymous[Ser431Ser]
1479 .. 1479 C/A rs200820675 - CDS Nonsynonymous[Leu439Met]
1493 .. 1493 C/G rs201719454 - CDS Nonsynonymous[Ser443Arg]
1499 .. 1499 C/T rs73079947 - CDS Synonymous[Asp445Asp]
1500 .. 1500 C/T rs201461876 - CDS Nonsynonymous[Arg446Cys]
1532 .. 1532 C/T rs142684842 - CDS Synonymous[Asn456Asn]
1542 .. 1542 G/C rs141605287 - CDS Nonsynonymous[Val460Leu]
1568 .. 1568 C/A rs148846226 - CDS Synonymous[Gly468Gly]
1593 .. 1593 G/A rs147087031 - CDS Nonsynonymous[Gly477Ser]
1601 .. 1601 C/G rs201332379 - CDS Synonymous[Pro479Pro]
1602 .. 1602 C/T rs200374067 - CDS Nonsynonymous[His480Tyr]
1620 .. 1620 G/A rs147945367 - CDS Nonsynonymous[Glu486Lys]
1624 .. 1624 T/C rs139676203 - CDS Nonsynonymous[Met487Thr]
1643 .. 1643 C/T rs151039993 - CDS Synonymous[Asp493Asp]
1644 .. 1644 G/A rs200454924 - CDS Nonsynonymous[Gly494Arg]
1661 .. 1661 G/A rs113086092 - CDS Synonymous[Arg499Arg]
1690 .. 1690 A/G rs146345221 - CDS Nonsynonymous[Tyr509Cys]
1697 .. 1697 C/T rs149871348 - CDS Synonymous[Tyr511Tyr]
1709 .. 1709 G/C rs146022512 - CDS Nonsynonymous[Glu515Asp]
1715 .. 1715 G/A rs138106140 - CDS Synonymous[Gln517Gln]
1730 .. 1730 C/T rs201710414 - CDS Synonymous[Pro522Pro]
1740 .. 1740 T/C rs200125065 - CDS Nonsynonymous[Cys526Arg]
1754 .. 1754 G/A rs146699147 - CDS Synonymous[Thr530Thr]
1800 .. 1800 T/G rs201088484 - CDS Nonsynonymous[Cys546Gly]
1814 .. 1814 C/T rs141250953 - CDS Synonymous[Asn550Asn]
1818 .. 1818 T/G rs200698765 - CDS Nonsynonymous[Cys552Gly]
1820 .. 1820 C/G rs200814952 - CDS Nonsynonymous[Cys552Trp]
1860 .. 1860 C/G rs200018597 - CDS Nonsynonymous[Arg566Gly]
1919 .. 1919 A/G rs141700335 - CDS Synonymous[Ser585Ser]
1971 .. 1971 C/T rs201160770 - CDS Synonymous[Leu603Leu]
1983 .. 1983 A/G rs143375126 - CDS Nonsynonymous[Ile607Val]
1985 .. 1985 C/T rs149213633 - CDS Synonymous[Ile607Ile]
1992 .. 1992 G/A rs139288752 - CDS Nonsynonymous[Ala610Thr]
2062 .. 2062 C/A rs12029683 - CDS Nonsynonymous[Pro633His]
2063 .. 2063 C/G rs143719037 - CDS Synonymous[Pro633Pro]
2076 .. 2076 G/A rs150558490 - CDS Nonsynonymous[Val638Ile]
2084 .. 2084 G/A rs73084907 - CDS Synonymous[Pro640Pro]
2156 .. 2156 C/T rs138661063 - CDS Synonymous[Thr664Thr]
2189 .. 2189 A/T rs11118983 - CDS Nonsynonymous[Gln675His]
2214 .. 2214 G/A rs200165110 - CDS Nonsynonymous[Ala684Thr]
2256 .. 2256 C/A rs187454222 - CDS Nonsynonymous[His698Asn]
2406 .. 2406 G/A rs143539447 - CDS Nonsynonymous[Gly748Ser]
2412 .. 2412 C/T rs150244971 - CDS AA-STOP[Arg750*]
2414 .. 2414 A/G rs200508299 - CDS Synonymous[Arg750Arg]
2443 .. 2443 G/A rs148156850 - CDS Nonsynonymous[Gly760Glu]
2458 .. 2458 T/C rs201718455 - CDS Nonsynonymous[Val765Ala]
2521 .. 2521 G/A rs185488994 - CDS Nonsynonymous[Gly786Asp]
2526 .. 2526 G/A rs140482051 - CDS Nonsynonymous[Asp788Asn]
2529 .. 2529 A/T rs143627584 - CDS Nonsynonymous[Ile789Phe]
2544 .. 2544 G/A rs200900857 - CDS Nonsynonymous[Val794Met]
2553 .. 2553 G/A rs145289578 - CDS Nonsynonymous[Ala797Thr]
2558 .. 2558 G/A rs201734545 - CDS Synonymous[Val798Val]
2567 .. 2567 C/T rs139151743 - CDS Synonymous[Asn801Asn]
2622 .. 2622 G/T rs76422797 - CDS Nonsynonymous[Ala820Ser]
2623 .. 2623 C/G rs17011882 - CDS Nonsynonymous[Ala820Gly]
2632 .. 2632 G/A rs144501612 - CDS Nonsynonymous[Arg823Gln]
2660 .. 2660 C/T/G rs142754644 - CDS
2675 .. 2675 G/T rs140708630 - CDS Nonsynonymous[Glu837Asp]
2685 .. 2685 T/G rs202222167 - CDS Nonsynonymous[Cys841Gly]
2719 .. 2719 A/G rs41309627 - CDS Nonsynonymous[His852Arg]
2734 .. 2734 C/T rs143711247 - CDS Nonsynonymous[Ser857Phe]
2748 .. 2748 G/A rs201952593 - CDS Nonsynonymous[Asp862Asn]
2792 .. 2792 C/T rs17011880 - CDS Synonymous[Thr876Thr]
2819 .. 2819 G/A rs140585758 - CDS Synonymous[Pro885Pro]
2850 .. 2850 G/A rs200059023 - CDS Nonsynonymous[Val896Met]
2876 .. 2876 G/A rs201065838 - CDS Synonymous[Glu904Glu]
2914 .. 2914 C/T rs147652560 - CDS Nonsynonymous[Thr917Met]
2915 .. 2915 G/A rs150738287 - CDS Synonymous[Thr917Thr]
2975 .. 2975 C/T rs199954172 - CDS Synonymous[Leu937Leu]
3000 .. 3000 C/T rs148647105 - CDS Nonsynonymous[Arg946Cys]
3017 .. 3017 G/A rs2274447 + CDS Synonymous[Glu951Glu]
3034 .. 3034 T/A rs138161636 - CDS Nonsynonymous[Met957Lys]
3058 .. 3058 C/A rs140488835 - CDS Nonsynonymous[Thr965Asn]
3063 .. 3063 G/A rs145943288 - CDS Nonsynonymous[Val967Met]
3069 .. 3069 C/G rs147629478 - CDS Nonsynonymous[Pro969Ala]
3096 .. 3096 C/T rs148394446 - CDS AA-STOP[Arg978*]
3104 .. 3104 C/T rs139454687 - CDS Synonymous[Pro980Pro]
3141 .. 3141 T/C rs200260543 - CDS Nonsynonymous[Tyr993His]
3200 .. 3200 C/T rs41283120 - CDS Synonymous[Tyr1012Tyr]
3236 .. 3236 C/G rs142802909 - CDS Synonymous[Pro1024Pro]
3259 .. 3259 C/G rs140131144 - CDS Nonsynonymous[Pro1032Arg]
3399 .. 3399 T/A rs146144297 - CDS Nonsynonymous[Phe1079Ile]
3460 .. 3460 T/C rs201743224 - CDS Nonsynonymous[Val1099Ala]
3463 .. 3463 A/G rs200078068 - CDS Nonsynonymous[Asn1100Ser]
3464 .. 3464 T/C rs199567905 - CDS Synonymous[Asn1100Asn]
3472 .. 3472 A/C rs148175324 - CDS Nonsynonymous[Lys1103Thr]
3488 .. 3488 C/T rs76872162 - CDS Synonymous[Thr1108Thr]
3660 .. 3660 A/G rs138766213 - CDS Nonsynonymous[Thr1166Ala]
3673 .. 3673 A/C rs146561678 - CDS Nonsynonymous[Asp1170Ala]
3845 .. 3845 C/T rs35172327 + CDS Synonymous[Val1227Val]
3846 .. 3846 A/G rs142056909 - CDS Nonsynonymous[Met1228Val]
3854 .. 3854 C/T rs146439640 - CDS Synonymous[His1230His]
3883 .. 3883 C/G rs140111660 - CDS Nonsynonymous[Ser1240Trp]
3915 .. 3915 C/G rs150042454 - CDS Nonsynonymous[Leu1251Val]
3942 .. 3942 G/A rs201310196 - CDS Nonsynonymous[Gly1260Ser]
3944 .. 3944 C/T rs201569933 - CDS Synonymous[Gly1260Gly]
3965 .. 3965 C/T rs150915206 - CDS Synonymous[Ile1267Ile]
3968 .. 3968 C/G rs200004691 - CDS Synonymous[Val1268Val]
3974 .. 3974 C/T rs139061737 - CDS Synonymous[Ile1270Ile]
4044 .. 4044 G/A rs201640497 - CDS Nonsynonymous[Asp1294Asn]
4146 .. 4146 C/T rs143907032 - CDS Nonsynonymous[Pro1328Ser]
4162 .. 4162 G/A rs199550486 - CDS Nonsynonymous[Arg1333His]
4169 .. 4169 C/T rs143549470 - CDS Synonymous[Tyr1335Tyr]
4184 .. 4184 G/A rs138624115 - CDS Synonymous[Leu1340Leu]
4212 .. 4212 C/T rs200733661 - CDS Synonymous[Leu1350Leu]
4216 .. 4216 G/A rs190868333 - CDS Nonsynonymous[Arg1351Gln]
4239 .. 4239 G/A rs201000832 - CDS Nonsynonymous[Gly1359Arg]
4318 .. 4318 G/A rs201132484 - CDS Nonsynonymous[Arg1385His]
4353 .. 4353 G/A rs140676022 - CDS Nonsynonymous[Asp1397Asn]
4380 .. 4380 A/C rs144005934 - CDS Nonsynonymous[Met1406Leu]
4386 .. 4386 G/C/A rs1472593 - CDS
4481 .. 4481 G/A rs201813522 - CDS Synonymous[Lys1439Lys]
4493 .. 4493 G/A rs146708658 - CDS Synonymous[Arg1443Arg]
4536 .. 4536 G/A rs12240051 - CDS Nonsynonymous[Ala1458Thr]
4643 .. 4643 G/A rs61744729 - CDS Synonymous[Thr1493Thr]
4646 .. 4646 C/T rs188406573 - CDS Synonymous[Gly1494Gly]
4660 .. 4660 C/T rs149856641 - CDS Nonsynonymous[Ser1499Phe]
4683 .. 4683 C/T rs147239739 - CDS Nonsynonymous[Arg1507Trp]
4704 .. 4704 A/G rs139968784 - CDS Nonsynonymous[Thr1514Ala]
4721 .. 4721 C/T rs113860539 - CDS Synonymous[Cys1519Cys]
4722 .. 4722 G/A rs200203717 - CDS Nonsynonymous[Val1520Ile]
4745 .. 4745 T/C rs141232026 - CDS Synonymous[Ser1527Ser]
4763 .. 4763 G/A rs142648481 - CDS Synonymous[Lys1533Lys]
4812 .. 4812 G/A rs200603904 - CDS Nonsynonymous[Ala1550Thr]
4815 .. 4815 G/A rs34457681 + CDS Nonsynonymous[Val1551Met]
4847 .. 4847 G/A rs145490141 - CDS Synonymous[Pro1561Pro]
4876 .. 4876 G/A rs200636622 - CDS Nonsynonymous[Arg1571His]
4885 .. 4885 G/A rs199754906 - CDS Nonsynonymous[Arg1574Gln]
4982 .. 4982 C/A rs151296962 - CDS Nonsynonymous[Asp1606Glu]
4987 .. 4987 C/T rs200900362 - CDS Nonsynonymous[Ser1608Leu]
4988 .. 4988 G/A rs141018338 - CDS Synonymous[Ser1608Ser]
5055 .. 5055 A/T rs147756054 - CDS Nonsynonymous[Thr1631Ser]
5072 .. 5072 T/C rs3736963 + CDS Synonymous[Tyr1636Tyr]
5092 .. 5092 C/T rs200628052 - CDS Nonsynonymous[Thr1643Met]
5093 .. 5093 G/A rs149381114 - CDS Synonymous[Thr1643Thr]
5102 .. 5102 C/T rs150555772 - CDS Synonymous[Pro1646Pro]
5112 .. 5112 C/T rs201528756 - CDS Nonsynonymous[Arg1650Trp]
5160 .. 5160 G/A rs146570184 - CDS Nonsynonymous[Val1666Met]
5189 .. 5189 C/T rs144221769 - CDS Synonymous[His1675His]
5190 .. 5190 G/A rs141503079 - CDS Nonsynonymous[Gly1676Ser]
5231 .. 5231 C/T rs149054185 - CDS Synonymous[Ser1689Ser]
5315 .. 5315 T/G rs56168065 - CDS Synonymous[Thr1717Thr]
5324 .. 5324 G/C rs201015477 - CDS Synonymous[Arg1720Arg]
5338 .. 5338 C/G rs201886384 - CDS Nonsynonymous[Pro1725Arg]
5340 .. 5340 C/T rs186740123 - CDS Synonymous[Leu1726Leu]
5346 .. 5346 A/G rs146748679 - CDS Nonsynonymous[Ile1728Val]
5460 .. 5460 G/A rs142549025 - CDS Nonsynonymous[Val1766Met]
5467 .. 5467 A/G rs200233292 - CDS Nonsynonymous[Lys1768Arg]
5480 .. 5480 C/T rs201452499 - CDS Synonymous[Phe1772Phe]
5513 .. 5513 C/T rs144314864 - CDS Synonymous[Asp1783Asp]
5543 .. 5543 C/T rs113155197 - CDS Synonymous[Phe1793Phe]
5567 .. 5567 G/A rs202208860 - CDS Synonymous[Glu1801Glu]
5663 .. 5663 C/A rs201880117 - CDS Synonymous[Ile1833Ile]
5711 .. 5711 C/T rs148742246 - CDS Synonymous[Ala1849Ala]
5729 .. 5729 C/T rs140101798 - CDS Synonymous[His1855His]
5733 .. 5733 G/A rs139305640 - CDS Nonsynonymous[Val1857Met]
5761 .. 5761 A/G rs141837222 - CDS Nonsynonymous[Asn1866Ser]
5777 .. 5777 T/C rs199906891 - CDS Synonymous[Tyr1871Tyr]
5807 .. 5807 G/C rs138665170 - CDS Synonymous[Gly1881Gly]
5827 .. 5827 A/T rs201356824 - CDS Nonsynonymous[Gln1888Leu]
5841 .. 5841 C/T rs141651654 - CDS Nonsynonymous[Arg1893Trp]
5842 .. 5842 G/A rs146958450 - CDS Nonsynonymous[Arg1893Gln]
6060 .. 6060 C/T rs111651146 - 3'UTR
6136 .. 6136 G/A rs192427240 - 3'UTR
6216 .. 6216 C/T rs11539012 - 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
Mini-G

 Repeat  Repeat mask viewer
No data available
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer