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H-Invitational ID: HIT000000174 Accession number: AB007926 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Disrupted in schizophrenia 1 protein isoform t.
 
 

Transcript original information
Accession number AB007926.1
CAGE tag ID NA
EST ID NA
Clone Number HG0693
Experimental resources NBRC: NITE Biological Resource Center  NBRC ; HGPD: Human Gene and Protein Database HGPD ; Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (DISC2) ; Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (DISC2);
Sequence data provider Provider:KDRI
Annotation project H-Invitational FLcDNA
Length of cDNA 6833[bp] (No. of exon:13)[A:1861 T:1725 G:1638 C:1609]
Devision HUM
Molecular type mRNA
Library origin Cell type NA
Tissue type brain
Develpmental stage NA
Mini-G
Sequence quality information
CDS feature Complete CDS
Kozak sequence NA
PolyA NA
Vector/adapter sequence NA
Frame shift NA
Remaining intron NA
Splice site acceptor (NAGNAG) NA
Transcript quality feature NA
Notes NA

Gene structure information  G-integra H-DBAS cDNA-genome alignment
H-Inv cluster ID HIX0022179
Genomic location  G-integra Help Chromosome 1
Location 1q42.2
Position 231762575- 232176872
Strand +
Possible duplicated location(s) NA
Gene structure 13 exon(s)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:27185
KEGG GENES KEGG GENES(27185)
GeneCard GeneCardDISC2*GeneCards is provided free to academic non-profit institutions.
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA-genome alignmentcDNA-genome alignment

Predicted CDS information
HIP ID HIP000083671
Predicted CDS 40..2538;  832[aa];  Orientation:+1; 
Codon Adaptation Index (CAI). 0.76

Gene function information  Gene family PPI viewer Similarity Search Tool TACT
H-Inv ID HIT000000174
H-Inv cluster ID Locus viewHIX0022179
Accession number AB007926.1
CAGE tag ID NA
EST ID NA
Transcript feature  Help NO; 
Coding potential  Help Protein coding; 
Definition Similar to Disrupted in schizophrenia 1 protein isoform t.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_001158028)  [Identity/coverage = 100.0%/85.57%] to Homo sapiens protein.
Experimental evidence Protein evidence
PubMed ID NA
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol DISC2
HGNC aliases NA
HGNC name disrupted in schizophrenia 2 (non-protein coding)
DDBJ KIAA0457
UniProt NA
EC number NA
GGDB
(GlycoGene Database)
Gene symbol NA
Familly NA
Designation NA
Expression NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000083671
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:27185
KEGG GENES KEGG GENES(27185)
GeneCard GeneCardDISC2*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Curation status Auto-annotated
Notes NA
Related H-InvDB links Gene familyGene family;  Similarity Search ToolSimilarity Search Tool;  TACTTACT
fRNAdb (The functional RNA database) : overlapping fRNAdb entries with H-InvDB transcripts based on the location of the genome. 
NA


Subcellular localization information  Last modified:27-May-2015
WoLF PSORT nuclear;  cytosol; 
Target P Other
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Protein structure information (GTOP) GTOP Last modified:27-May-2015
Start End PDB_ID E-value Identity Coverage SCOP_ID
699 818 1gqeA 4e-05 19.5 113/100 e.38.1.1
Related H-InvDB links GTOP GTOP

Gene expression information  H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA111314; 
Affymetrix
GeneChip
HG-Focus 206090_s_at; 
HG-U133 206090_s_at;  217330_at; 
HG-U133A 206090_s_at;  217330_at; 
HG-U133A_2 206090_s_at;  217330_at; 
HG-U133B NA
HG-U133_Plus_2 206090_s_at;  217330_at; 
HG-U95 39603_at; 
HG-U95A 39603_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2385344;  2385345;  2385355;  2385356;  2385357;  2385358;  2385359;  2385362;  2385380;  2385385;  2385386;  2385389;  2385390;  2385391;  2385399;  2385402;  2385407;  2385430;  2385443;  2385453;  2385457;  2385458;  2460646;  2460648;  2460739; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P62967; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P62967;  A_24_P83787; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name: {Schizoaffective disorder, susceptibility to} (181500);  Disease name: {Schizophrenia, susceptibility to} (604906); 
Related information in OMIM OMIM ID:  605210;  Title: DISRUPTED IN SCHIZOPHRENIA 1
Co-localized orphan diseases NA
Disease related mutation MutationView:  605210
JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Literature-Extracted GENe-Disease Associations (LEGENDA) LEGENDA Gene name Entrez Gene ID:(27185)
Disease Entrez Gene ID:(27185)
Substance Entrez Gene ID:(27185)
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA

Polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information  VaryGene Repeat mask viewer
 Single Nucleotide Polymorphism (SNP) and indel  VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
33 .. 33 G/A rs3738399 + 5'UTR
53 .. 53 G/T rs3738400 + CDS Nonsynonymous[Gly5Val]
77 .. 77 C/G rs79978593 + CDS Nonsynonymous[Ala13Gly]
111 .. 111 C/A rs142035917 + CDS Nonsynonymous[Ser24Arg]
113 .. 113 G/A rs143922209 + CDS Nonsynonymous[Arg25Gln]
148 .. 148 C/T rs202102981 + CDS Nonsynonymous[Arg37Trp]
151 .. 151 C/T rs137948488 + CDS Nonsynonymous[Arg38Trp]
160 .. 160 C/T rs202017627 + CDS Nonsynonymous[Arg41Trp]
235 .. 235 C/T rs147261047 + CDS Nonsynonymous[Arg66Trp]
250 .. 250 G/T rs149444280 + CDS Nonsynonymous[Val71Leu]
258 .. 258 C/T rs201590659 + CDS Synonymous[Gly73Gly]
266 .. 266 C/T rs77062350 + CDS Nonsynonymous[Ser76Phe]
275 .. 275 C/T rs138332232 + CDS Nonsynonymous[Ser79Leu]
287 .. 287 C/T rs76175896 + CDS Nonsynonymous[Ala83Val]
294 .. 294 G/A rs199501041 + CDS Synonymous[Gln85Gln]
308 .. 308 C/T rs200850282 + CDS Nonsynonymous[Ser90Leu]
309 .. 309 G/A rs145101392 + CDS Synonymous[Ser90Ser]
329 .. 329 G/C rs150563134 + CDS Nonsynonymous[Ser97Thr]
330 .. 330 C/T rs149755964 + CDS Synonymous[Ser97Ser]
355 .. 355 C/A rs34574703 + CDS Nonsynonymous[Pro106Thr]
386 .. 386 C/T rs56020408 + CDS Nonsynonymous[Ala116Val]
387 .. 387 G/A rs189101828 + CDS Synonymous[Ala116Ala]
405 .. 405 C/A rs140910315 + CDS Synonymous[Leu122Leu]
472 .. 472 C/T rs151311391 + CDS AA-STOP[Gln145*]
496 .. 496 T/C rs201600649 + CDS Nonsynonymous[Ser153Pro]
505 .. 505 C/A rs150489951 + CDS Nonsynonymous[Leu156Met]
518 .. 518 G/T rs143796295 + CDS Nonsynonymous[Trp160Leu]
521 .. 521 A/G rs139091980 + CDS Nonsynonymous[Glu161Gly]
530 .. 530 G/T rs181767113 + CDS Nonsynonymous[Cys164Phe]
547 .. 547 C/T rs186593988 + CDS Nonsynonymous[Arg170Cys]
594 .. 594 C/T rs139667828 + CDS Synonymous[Asn185Asn]
616 .. 616 C/T rs112577310 + CDS Nonsynonymous[Pro193Ser]
628 .. 628 C/G rs141270877 + CDS Nonsynonymous[Pro197Ala]
633 .. 633 C/A rs201901960 + CDS Synonymous[Thr198Thr]
666 .. 666 C/T rs200704946 + CDS Synonymous[Ser209Ser]
680 .. 680 G/A rs199617790 + CDS Nonsynonymous[Arg214Gln]
686 .. 686 C/T rs139420445 + CDS Nonsynonymous[Ser216Leu]
707 .. 707 G/A rs146439119 + CDS Nonsynonymous[Arg223His]
737 .. 737 G/A rs201249128 + CDS Nonsynonymous[Arg233Lys]
746 .. 746 A/C rs201556843 + CDS Nonsynonymous[Glu236Ala]
749 .. 749 C/A rs199530992 + CDS Nonsynonymous[Ser237Tyr]
798 .. 798 C/T rs113312552 + CDS Synonymous[Asp253Asp]
805 .. 805 C/G rs199893176 + CDS Nonsynonymous[His256Asp]
818 .. 818 G/A rs149702548 + CDS Nonsynonymous[Arg260Gln]
829 .. 829 C/T rs148973353 + CDS AA-STOP[Gln264*]
830 .. 830 A/G rs3738401 + CDS Nonsynonymous[Gln264Arg]
846 .. 846 G/T rs146356052 + CDS Nonsynonymous[Leu269Phe]
854 .. 854 G/A rs141459782 + CDS Nonsynonymous[Arg272Gln]
855 .. 855 G/A rs201258158 + CDS Synonymous[Arg272Arg]
879 .. 879 C/T rs138228295 + CDS Synonymous[Ala280Ala]
899 .. 899 C/T rs146244276 + CDS Nonsynonymous[Pro287Leu]
904 .. 904 C/T rs201677901 + CDS Nonsynonymous[Arg289Cys]
907 .. 907 G/C rs181037363 + CDS Nonsynonymous[Asp290His]
1016 .. 1016 G/T rs142641202 + CDS Nonsynonymous[Trp326Leu]
1022 .. 1022 C/A rs55795950 + CDS Nonsynonymous[Thr328Asn]
1027 .. 1027 C/T rs34622148 + CDS Nonsynonymous[Leu330Phe]
1073 .. 1073 G/A rs77080351 + CDS Nonsynonymous[Arg345Gln]
1079 .. 1079 A/G rs76372333 + CDS Nonsynonymous[Gln347Arg]
1087 .. 1087 G/T rs78640112 + CDS Nonsynonymous[Val350Leu]
1144 .. 1144 G/A rs139096455 + CDS Nonsynonymous[Asp369Asn]
1167 .. 1167 A/G rs200802543 + CDS Synonymous[Leu376Leu]
1288 .. 1288 C/T rs193024019 + CDS Nonsynonymous[Arg417Cys]
1289 .. 1289 G/A rs201902199 + CDS Nonsynonymous[Arg417His]
1292 .. 1292 G/A rs144959108 + CDS Nonsynonymous[Arg418His]
1300 .. 1300 A/G rs148920333 + CDS Nonsynonymous[Thr421Ala]
1315 .. 1315 G/A rs200019964 + CDS Nonsynonymous[Gly426Arg]
1334 .. 1334 C/T rs78792190 + CDS Nonsynonymous[Pro432Leu]
1349 .. 1349 C/T rs142645368 + CDS Nonsynonymous[Pro437Leu]
1386 .. 1386 C/T rs116628628 + CDS Synonymous[His449His]
1387 .. 1387 G/A rs149233802 + CDS Nonsynonymous[Val450Met]
1395 .. 1395 C/T rs34268403 + CDS Synonymous[Ile452Ile]
1397 .. 1397 C/T rs28930675 + CDS Nonsynonymous[Thr453Met]
1398 .. 1398 G/A rs144844117 + CDS Synonymous[Thr453Thr]
1403 .. 1403 G/A rs78852015 + CDS Nonsynonymous[Arg455Gln]
1432 .. 1432 C/T rs3738402 + CDS Synonymous[Leu465Leu]
1446 .. 1446 C/T rs2492367 + CDS Synonymous[Ile469Ile]
1447 .. 1447 G/A rs138886515 + CDS Nonsynonymous[Glu470Lys]
1456 .. 1456 C/T rs200412573 + CDS AA-STOP[Gln473*]
1473 .. 1473 G/T rs144785732 + CDS Synonymous[Val478Val]
1490 .. 1490 A/G rs199502948 + CDS Nonsynonymous[Gln484Arg]
1555 .. 1555 C/T rs150294573 + CDS Nonsynonymous[Pro506Ser]
1572 .. 1572 G/T rs145261336 + CDS Synonymous[Leu511Leu]
1600 .. 1600 A/T rs143500026 + CDS AA-STOP[Lys521*]
1628 .. 1628 C/G rs200669845 + CDS Nonsynonymous[Ala530Gly]
1630 .. 1630 G/C rs56229136 + CDS Nonsynonymous[Gly531Arg]
1655 .. 1655 C/T rs147158825 + CDS Nonsynonymous[Pro539Leu]
1658 .. 1658 C/A/G rs143165003 + CDS
1659 .. 1659 G/A rs148583596 + CDS Synonymous[Pro540Pro]
1720 .. 1720 A/G rs76230451 + CDS Nonsynonymous[Thr561Ala]
1761 .. 1761 G/A rs201489476 + CDS Synonymous[Leu574Leu]
1763 .. 1763 G/A rs202013247 + CDS Nonsynonymous[Arg575Lys]
1795 .. 1795 C/G rs192018321 + CDS Nonsynonymous[Pro586Ala]
1837 .. 1837 C/A rs143689741 + CDS Nonsynonymous[His600Asn]
1847 .. 1847 C/T rs148111679 + CDS Nonsynonymous[Thr603Met]
1848 .. 1848 G/A rs117884450 + CDS Synonymous[Thr603Thr]
1858 .. 1858 C/T rs6675281 + CDS Nonsynonymous[Leu607Phe]
1863 .. 1863 C/T rs140611432 + CDS Synonymous[Thr608Thr]
1864 .. 1864 G/A rs150138912 + CDS Nonsynonymous[Glu609Lys]
1874 .. 1874 G/A rs200043911 + CDS Nonsynonymous[Arg612Lys]
1902 .. 1902 G/A rs12133766 + CDS Synonymous[Leu621Leu]
1975 .. 1975 T/C rs148065829 + CDS Nonsynonymous[Tyr646His]
2027 .. 2027 G/A rs201138012 + CDS Nonsynonymous[Ser663Asn]
2134 .. 2134 C/G rs190975963 + CDS Nonsynonymous[Arg699Gly]
2145 .. 2145 C/A rs2806455 + CDS Synonymous[Ile702Ile]
2149 .. 2149 A/T rs821616 - CDS Nonsynonymous[Ser704Cys]
2211 .. 2211 C/T rs112054353 + CDS Synonymous[Asp724Asp]
2241 .. 2241 C/A rs138051341 + CDS Synonymous[Pro734Pro]
2343 .. 2343 G/A rs200687715 + CDS Synonymous[Leu768Leu]
2475 .. 2475 G/A rs41271517 + CDS Synonymous[Glu812Glu]
2558 .. 2558 G/C rs112807868 + 3'UTR
2735 .. 2735 G/C rs75779221 + 3'UTR
2747 .. 2747 C/A rs113238366 + 3'UTR
2789 .. 2789 G/T rs79424400 + 3'UTR
2790 .. 2790 T/A rs75712790 + 3'UTR
2799 .. 2799 G/A rs3737597 - 3'UTR
2804 .. 2804 G/A rs201730777 + 3'UTR
2838 .. 2838 G/T rs11589636 + 3'UTR
2844 .. 2844 A/C rs112303659 + 3'UTR
2863 .. 2863 G/A rs77178075 + 3'UTR
2888 .. 2888 C/T rs201571443 + 3'UTR
2943 .. 2943 A/G rs72762368 + 3'UTR
3079 .. 3079 A/T rs140751631 + 3'UTR
3135 .. 3135 C/T rs60193126 + 3'UTR
3153 .. 3153 T/C rs142965400 + 3'UTR
3154 .. 3154 T/C rs150851326 + 3'UTR
3171 .. 3171 G/A rs139283763 + 3'UTR
3196 .. 3196 T/C rs200513980 + 3'UTR
3201 .. 3201 G/T rs193108907 + 3'UTR
3311 .. 3311 T/A rs78591239 + 3'UTR
3349 .. 3349 G/A rs112847297 + 3'UTR
3357 .. 3357 G/C rs150006709 + 3'UTR
3402 .. 3402 C/T rs113782883 + 3'UTR
3482 .. 3482 C/T rs11578905 + 3'UTR
3512 .. 3512 T/C rs2776624 + 3'UTR
3521 .. 3521 G/T rs61835610 + 3'UTR
3605 .. 3605 A/G rs148449456 + 3'UTR
3615 .. 3615 C/T rs144167464 + 3'UTR
3646 ^ 3647 -/AC rs200410500 + 3'UTR
3649 ^ 3650 -/CA rs200308759 + 3'UTR
3664 ^ 3665 -/AC rs201348679 + 3'UTR
3707 .. 3707 A/T rs185364817 + 3'UTR
3748 .. 3748 G/T rs190557668 + 3'UTR
3858 .. 3858 C/T rs112263707 + 3'UTR
3906 .. 3906 A/G rs116099257 + 3'UTR
3913 .. 3913 G/A rs55900971 + 3'UTR
3917 .. 3917 T/G rs199656948 + 3'UTR
3993 .. 3993 G/A rs199803540 + 3'UTR
4014 .. 4014 A/T rs9661748 + 3'UTR
4075 .. 4075 A/G rs146507244 + 3'UTR
4134 .. 4134 T/C rs9729179 + 3'UTR
4227 .. 4227 G/A rs41303125 + 3'UTR
4276 .. 4276 T/C rs41307732 + 3'UTR
4282 .. 4282 G/A rs9793915 + 3'UTR
4316 .. 4316 C/T rs201868454 + 3'UTR
4360 .. 4360 C/T rs200522264 + 3'UTR
4387 .. 4387 T/C rs186349418 + 3'UTR
4404 .. 4404 C/A rs187957550 + 3'UTR
4414 .. 4414 G/T rs201271103 + 3'UTR
4506 .. 4506 A/G rs140824380 + 3'UTR
4647 .. 4647 G/A rs201643607 + 3'UTR
4711 .. 4711 G/C rs202081292 + 3'UTR
4736 .. 4736 T/C rs1411771 + 3'UTR
4748 .. 4748 G/A rs201847001 + 3'UTR
4875 .. 4875 C/T rs144565562 + 3'UTR
4899 .. 4899 A/G rs9661837 + 3'UTR
4934 .. 4934 T/C rs200435335 + 3'UTR
4949 .. 4949 A/G rs41303123 + 3'UTR
4973 .. 4973 T/C rs201683942 + 3'UTR
4995 .. 4995 G/A rs72762370 + 3'UTR
5014 .. 5014 G/A rs202239225 + 3'UTR
5051 .. 5051 T/C rs180865071 + 3'UTR
5096 .. 5096 A/C rs112775285 + 3'UTR
5109 .. 5109 C/T rs151172119 + 3'UTR
5112 .. 5112 T/C rs201198022 + 3'UTR
5128 .. 5128 G/A rs201925191 + 3'UTR
5147 .. 5147 A/T rs185422574 + 3'UTR
5229 .. 5229 A/G rs11122396 + 3'UTR
5273 .. 5273 A/C rs140238958 + 3'UTR
5280 .. 5280 G/A rs200225551 + 3'UTR
5287 .. 5287 G/A rs150323238 + 3'UTR
5374 .. 5374 T/C rs138289086 + 3'UTR
5382 .. 5382 A/G rs76310864 + 3'UTR
5466 .. 5466 C/T rs143979122 + 3'UTR
5483 .. 5483 G/A rs201096400 + 3'UTR
5513 .. 5513 C/T rs114066143 + 3'UTR
5516 .. 5516 A/G rs201296840 + 3'UTR
5520 .. 5520 T/G rs113563872 + 3'UTR
5530 .. 5530 G/A rs41303103 + 3'UTR
5626 .. 5626 C/G rs78843900 + 3'UTR
5657 ^ 5658 -/GTCT rs139756128 + 3'UTR
5658 ^ 5659 -/CTGT rs35280852 + 3'UTR
5659 ^ 5660 -/CTGT rs66812730 + 3'UTR
5660 ^ 5661 -/GTCT rs3028413 + 3'UTR
5661 .. 5661 A/G rs200157280 + 3'UTR
5661 ^ 5662 -/GTCT rs35621458 + 3'UTR
5706 .. 5706 T/C rs9729647 + 3'UTR
5714 .. 5714 G/T rs79148624 + 3'UTR
5813 .. 5813 C/T rs191369449 + 3'UTR
5827 .. 5827 T/C rs139295216 + 3'UTR
5854 .. 5854 G/A rs183575865 + 3'UTR
5855 .. 5855 G/A rs143007031 + 3'UTR
5905 .. 5905 G/A rs186909557 + 3'UTR
5936 .. 5936 C/T rs144699433 + 3'UTR
5980 .. 5980 T/G rs77476692 + 3'UTR
5990 .. 5990 C/T rs12404162 + 3'UTR
5997 .. 5997 G/T rs191945184 + 3'UTR
6022 .. 6022 T/C rs183285639 + 3'UTR
6112 .. 6112 C/T rs74392082 + 3'UTR
6113 .. 6113 G/A rs187910126 + 3'UTR
6156 .. 6156 G/T rs980989 + 3'UTR
6213 .. 6213 A/G rs148085646 + 3'UTR
6267 .. 6267 G/A rs9308481 + 3'UTR
6269 ^ 6270 -/A rs34473218 + 3'UTR
6277 .. 6277 A/T rs189689658 + 3'UTR
6371 .. 6371 C/A rs182466393 + 3'UTR
6472 .. 6472 A/G rs200923506 + 3'UTR
6517 .. 6517 A/G rs187175205 + 3'UTR
6535 .. 6535 C/G rs200835938 + 3'UTR
6560 .. 6560 C/T rs114459058 + 3'UTR
6722 .. 6722 T/C rs115493305 + 3'UTR
6730 .. 6730 C/T rs11803088 + 3'UTR
 Microsatellite (Short Tandem Repeat, STR)
No data available
 Microsatellite: Human-Gene diversity Of Life-style related Diseases (H-GOLD)
No data available
 Repeat  Repeat mask viewer
Type Start End Strand
MER103C 4064 4330 -
AluSx1 5698 6000 -
MIRb 6124 6318 -
Database links H-GOLDHuman-Gene diversity Of Life-style related Diseases(H-GOLD)
Related H-InvDB links VaryGeneVaryGene Repeat mask viewerRepeat Mask Viewer