H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0214543 Created date: 20-May-2015 Last modified: 27-May-2015
Definition: Similar to Mitogen-activated protein kinase kinase kinase 19; EC=2.7.11.1; Regulated in COPD, protein kinase; SPS1/STE20-related protein kinase YSK4;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0214543
Genomic location  G-integra Help Chromosome 2
Location 2q21.3
Position 135737231- 135744611
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:80122
KEGG GENES KEGG GENES(80122)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000249504HIT000042130HIT000010001HIT000022376HIT000384709
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-5 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000249504
Accession number AK131216.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitogen-activated protein kinase kinase kinase 19; EC=2.7.11.1; Regulated in COPD, protein kinase; SPS1/STE20-related protein kinase YSK4;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q56UN5)  [Identity/coverage = 99.287%/52.79%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135738286- 135744611
Strand -
Gene structure 3 exons
 
TOP 1-5 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000042130
Accession number BC034417.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitogen-activated protein kinase kinase kinase 19; EC=2.7.11.1; Regulated in COPD, protein kinase; SPS1/STE20-related protein kinase YSK4;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q56UN5)  [Identity/coverage = 94.186%/19.43%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135738285- 135741049
Strand -
Gene structure 2 exons
 
TOP 1-5 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000010001
Accession number AK026727.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitogen-activated protein kinase kinase kinase 19; EC=2.7.11.1; Regulated in COPD, protein kinase; SPS1/STE20-related protein kinase YSK4;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q56UN5)  [Identity/coverage = 98.312%/17.85%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135737231- 135739222
Strand -
Gene structure 1 exons
 
TOP 1-5 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000022376
Accession number AK097522.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135739471- 135741107
Strand -
Gene structure 1 exons
 
TOP 1-5 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000384709
Accession number AK225579.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitogen-activated protein kinase kinase kinase 19; EC=2.7.11.1; Regulated in COPD, protein kinase; SPS1/STE20-related protein kinase YSK4;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q56UN5)  [Identity/coverage = 98.312%/17.85%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135737246- 135739222
Strand -
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms NA
Position of alternative splicing isoforms NA
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000249504Splicing isoformHIT000042130
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0214543
Representative H-Inv ID Representative H-Inv IDHIT000249504
Accession number AK131216.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Mitogen-activated protein kinase kinase kinase 19; EC=2.7.11.1; Regulated in COPD, protein kinase; SPS1/STE20-related protein kinase YSK4;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q56UN5)  [Identity/coverage = 99.287%/52.79%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000346551
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:80122
KEGG GENES KEGG GENES(80122)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA061001; 
Affymetrix
GeneChip
HG-Focus NA
HG-U133 NA
HG-U133A NA
HG-U133A_2 NA
HG-U133B NA
HG-U133_Plus_2 1555804_a_at; 
HG-U95 55473_at; 
HG-U95A NA
HG-U95B NA
HG-U95C 55473_at; 
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2577651;  2577652;  2577653;  2577657;  2577658;  2577660;  2577661; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 A_24_P63078; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator