H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0202397 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Protein FAM18B1;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0202397
Genomic location  G-integra Help Chromosome 17
Location NA
Position 18684308- 18710027
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NM_016078; 
Ensembl ENST00000523573;  ENST00000482741;  ENST00000476139;  ENST00000521179;  ENST00000307767; 
Entrez Gene Entrez Gene ID:51030; 
KEGG GENES KEGG GENES(51030); 
GeneCard GeneCardFAM18B1;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000290436;  HIT000033788;  HIT000054713;  HIT000056814;  HIT000002342;  HIT000047992;  HIT000071719;  HIT000423610;  HIT000298022;  HIT000282651;  HIT000273410;  HIT000280150;  HIT000290832; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-10 11-13 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000290436
Accession number CR611241.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location NA
Position 18684519- 18710006
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000033788
Accession number BC008430.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18684582- 18710026
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000054713
Accession number BX537929.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 99.512%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18684593- 18710027
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000056814
Accession number BX648167.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein FAM18B1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9NYZ1)  [Identity/coverage = 99.5%/97.56%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location NA
Position 18684627- 18710027
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000002342
Accession number AF223467.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 99.512%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18684308- 18709379
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000047992
Accession number AK128119.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein FAM18B1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9NYZ1)  [Identity/coverage = 99.206%/61.46%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location NA
Position 18698993- 18709825
Strand +
Gene structure 4 exons
 
TOP 1-10 11-13 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000071719
Accession number AF151906.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 99.024%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18684308- 18710027
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000423610
Accession number AK290813.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 99.024%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18684584- 18709840
Strand +
Gene structure 7 exons
 
TOP 1-10 11-13 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000298022
Accession number CR618827.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein FAM18B1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9NYZ1)  [Identity/coverage = 100.0%/98.54%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location NA
Position 18692652- 18709996
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000282651
Accession number CR603456.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein FAM18B1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9NYZ1)  [Identity/coverage = 100.0%/98.54%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18692663- 18709850
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000273410
Accession number CR594215.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein FAM18B1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9NYZ1)  [Identity/coverage = 100.0%/98.54%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18692663- 18709823
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000280150
Accession number CR600955.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein FAM18B1;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9NYZ1)  [Identity/coverage = 100.0%/98.54%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18692663- 18709805
Strand +
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000290832
Accession number CR611637.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location NA
Position 18709053- 18709901
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms NA
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000290436;  Splicing isoformHIT000047992;  Splicing isoformHIT000298022;  Splicing isoformHIT000056814; 
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0202397
Representative H-Inv ID Representative H-Inv IDHIT000290436
Accession number CR611241.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein FAM18B1;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9NYZ1)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID HIF0000667
Gene family/group name Putative Protein of unknown function DUF846, eukaryotic (IPR008564).
Evidence motif (InterPro) ID IPR008564
Gene symbol/name HGNC symbol FAM18B1 
HGNC aliases "family with sequence similarity 18, member B" 
HGNC name family with sequence similarity 18, member B1 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000075253
No. of interaction 2
Interaction partner(s) HIP000030029;  HIP000031586; 
BIND NA
DIP 111596E; 
MINT MINT-2873110; 
HPRD 00082;  07389; 
IntAct EBI-4397696;  EBI-950122; 
Database links RefSeq NM_016078; 
Ensembl ENST00000523573;  ENST00000482741;  ENST00000476139;  ENST00000521179;  ENST00000307767; 
Entrez Gene Entrez Gene ID:51030; 
KEGG GENES KEGG GENES(51030); 
GeneCard GeneCardFAM18B1;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Putative Protein of unknown function DUF846, eukaryotic (IPR008564). Similarity Search ToolSimilarity search tool;  TACTTACT; 
Gene expression information   H-ANGEL DNAProbeLocator Last modified:20-Apr-2012
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator		 AceGene AGhsA060210; 
Affymetrix
GeneChip		 HG-Focus NA
HG-U133 218446_s_at; 
HG-U133A 218446_s_at; 
HG-U133A_2 218446_s_at; 
HG-U133B NA
HG-U133_Plus_2 218446_s_at; 
HG-U95 46234_at;  78780_at; 
HG-U95A NA
HG-U95B 46234_at; 
HG-U95C NA
HG-U95D NA
HG-U95E 78780_at; 
HG-U95Av2 NA
HuEx-1_0 3585271;  3649089;  3649094;  3649095;  3649096;  3649097;  3711669;  3713553;  3713557;  3713558;  3713559;  3713560;  3713561;  3713562;  3746742;  3746743;  3746745;  3748593;  3748595; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P118516; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P118516; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator; 

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:20-Apr-2012
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  215500;  604547;  607354;  608904;  610185; 
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(51030); 
Disease Entrez Gene ID:(51030); 
Gene function Entrez Gene ID:(51030); 
Substance Entrez Gene ID:(51030); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo Viewer;  LEGENDALEGENDA;