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H-Inv cluster ID: HIX0201311 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Retrovirus capsid, N-terminal core domain containing protein.

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Gene structure

H-Inv cluster ID		HIX0201311
Genomic location	Chromosome	8
	Location	NA
	Position	607192- 611619
	Strand	-
Antisense cluster ID(s)		NA
Database links	RefSeq	NA
	Ensembl	ENST00000499740;
	Entrez Gene	Entrez Gene ID:389607;
	KEGG GENES	KEGG GENES(389607);
	GeneCard	NA *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Cluster member H-Inv ID(s)		HIT000048191;
Additional cluster member candidate(s)		NA
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000048191
Accession number		AK128318.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Retrovirus capsid, N-terminal core domain containing protein.
Similarity category		Category: IPR domain containing protein(Category III).
		InterPro domain (IPR008919) -containing protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Representative transcript;
Genomic location	Chromosome	8
	Location	NA
	Position	607192- 611619
	Strand	-
Gene structure		2 exons

Gene function information

H-Inv cluster ID		HIX0201311
Representative H-Inv ID		HIT000048191
Accession number		AK128318.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Retrovirus capsid, N-terminal core domain containing protein.
Similarity category		Category: IPR domain containing protein(Category III).
		InterPro domain (IPR008919) -containing protein.
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000094834
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NA
	Ensembl	ENST00000499740;
	Entrez Gene	Entrez Gene ID:389607;
	KEGG GENES	KEGG GENES(389607);
	GeneCard	NA *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Related H-InvDB links		G-integra;  PPI view;  H-DBAS;  Gene family;  Similarity search tool;  TACT;

Gene expression information

Last modified:20-Apr-2012

Tissue-specific expression			NA
Probe information	AceGene		NA
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	NA
		HG-U133A	NA
		HG-U133A_2	NA
		HG-U133B	NA
		HG-U133_Plus_2	NA
		HG-U95	NA
		HG-U95A	NA
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	3121312;  3121313;  3121315;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	NA
		Whole Human Genome Oligo Microarray:PGID247	A_24_P660811;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:20-Apr-2012

Disease relation			Disease name:NA
Related information in OMIM			OMIM ID:NA Title:NA
Co-localized orphan diseases			OMIM ID:  148370;  606129;  606662;  609259;  612279;
Disease related mutation			NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA)	Gene name	Entrez Gene ID:(389607);
	Disease	Entrez Gene ID:(389607);
	Gene function	Entrez Gene ID:(389607);
	Substance	Entrez Gene ID:(389607);
Related H-InvDB links			DiseaseInfo Viewer;  LEGENDA;