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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0200713 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Cytoplasmic polyadenylation element-binding protein 4; CPE-BP4; CPE-binding protein 4; hCPEB-4;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0200713
Genomic location  G-integra Help Chromosome 5
Location 5q35.2
Position 173315283- 173388979
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:80315
KEGG GENES KEGG GENES(80315)
GeneCard GeneCardCPEB4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000387440HIT000054995HIT000001389HIT000051840HIT000502397HIT000502398HIT000429771HIT000563796
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-8 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000387440
Accession number BC117150.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Cytoplasmic polyadenylation element-binding protein 4; CPE-BP4; CPE-binding protein 4; hCPEB-4;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q17RY0)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173316343- 173383238
Strand +
Gene structure 10 exons
 
TOP 1-8 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000054995
Accession number BX538213.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Cytoplasmic polyadenylation element-binding protein 4; CPE-BP4; CPE-binding protein 4; hCPEB-4;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q17RY0)  [Identity/coverage = 99.863%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature NA
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173316189- 173387311
Strand +
Gene structure 10 exons
 
TOP 1-8 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000001389
Accession number AB051460.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic polyadenylation element-binding protein 4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_085130)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173316669- 173387312
Strand +
Gene structure 9 exons
 
TOP 1-8 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000051840
Accession number BC036899.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic polyadenylation element-binding protein 4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_085130)  [Identity/coverage = 99.696%/48.56%] to Homo sapiens protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173320081- 173383446
Strand +
Gene structure 8 exons
 
TOP 1-8 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000502397
Accession number BC143958.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic polyadenylation element-binding protein 4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_085130)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature NA
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173316343- 173383238
Strand +
Gene structure 9 exons
 
TOP 1-8 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000502398
Accession number BC143959.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic polyadenylation element-binding protein 4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_085130)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173316343- 173383238
Strand +
Gene structure 8 exons
 
TOP 1-8 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000429771
Accession number AK310905.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic polyadenylation element-binding protein 4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_085130)  [Identity/coverage = 99.683%/89.85%] to Homo sapiens protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173316534- 173380442
Strand +
Gene structure 7 exons
 
TOP 1-8 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000563796
Accession number AB586689.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Cytoplasmic polyadenylation element-binding protein 4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_085130)  [Identity/coverage = 100.0%/10.15%] to Homo sapiens protein.
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q35.2
Position 173371941- 173383822
Strand +
Gene structure 5 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Mutually exclusive;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000563796Splicing isoformHIT000429771Splicing isoformHIT000051840Splicing isoformHIT000387440Splicing isoformHIT000502398Splicing isoformHIT000001389
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0200713
Representative H-Inv ID Representative H-Inv IDHIT000387440
Accession number BC117150.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Cytoplasmic polyadenylation element-binding protein 4; CPE-BP4; CPE-binding protein 4; hCPEB-4;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q17RY0)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol CPEB4 
HGNC aliases NA
HGNC name cytoplasmic polyadenylation element binding protein 4 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000055675
No. of interaction 1
Interaction partner(s) HIP000034548
BIND NA
DIP NA
MINT MINT-8176493;  MINT-8182510; 
HPRD 09273; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:80315
KEGG GENES KEGG GENES(80315)
GeneCard GeneCardCPEB4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT