H-InvDB x AHG DB
Locus view
H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0077693 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Non-protein-coding transcript, C/D box guide small nucleolar RNA (snoRNA) SNORD20 / U20
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0077693
Genomic location  G-integra Help Chromosome 2
Location 2q37.1
Position 232321155- 232321234
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NR_002908
Ensembl ENST00000384550
Entrez Gene Entrez Gene ID:6082
KEGG GENES KEGG GENES(6082)
GeneCard GeneCardSNORD20*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000383124
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000383124
Accession number Z34290.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, C/D box guide small nucleolar RNA (snoRNA) SNORD20 / U20
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol SNORD20 
HGNC aliases "RNA, U20 small nucleolar" 
HGNC name small nucleolar RNA, C/D box 20 
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 2
Location 2q37.1
Position 232321155- 232321234
Strand -
Gene structure 1 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0077693
Representative H-Inv ID Representative H-Inv IDHIT000383124
Accession number Z34290.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, C/D box guide small nucleolar RNA (snoRNA) SNORD20 / U20
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol SNORD20 
HGNC aliases "RNA, U20 small nucleolar" 
HGNC name small nucleolar RNA, C/D box 20 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID NA
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NR_002908
Ensembl ENST00000384550
Entrez Gene Entrez Gene ID:6082
KEGG GENES KEGG GENES(6082)
GeneCard GeneCardSNORD20*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view;  H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:26-Mar-2013
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus NA
HG-U133 NA
HG-U133A NA
HG-U133A_2 NA
HG-U133B NA
HG-U133_Plus_2 NA
HG-U95 NA
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2603472; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 NA
Whole Human Genome Oligo Microarray:PGID247 NA
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:26-Mar-2013
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  600430605934606053606963609995
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(6082); 
Disease Entrez Gene ID:(6082); 
Gene function Entrez Gene ID:(6082); 
Substance Entrez Gene ID:(6082); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA