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H-Inv cluster ID: HIX0057992 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: HLA class II histocompatibility antigen, DM alpha chain precursor.

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TOP 1-8 LAST

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000035253_05
Accession number		BC011447.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		HLA class II histocompatibility antigen, DM alpha chain precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_006111)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	HLA-DMA
	HGNC aliases	NA
	HGNC name	major histocompatibility complex, class II, DM alpha
Transcript feature		Representative transcript;  Splicing isoform
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4373608- 4378080
	Strand	-
Gene structure		5 exons

 

TOP 1-8 LAST

Locus member number		2
H-Inv ID		HIT000040177_05
Accession number		BC026279.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		HLA class II histocompatibility antigen, DM alpha chain precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_006111)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	HLA-DMA
	HGNC aliases	NA
	HGNC name	major histocompatibility complex, class II, DM alpha
Transcript feature		NA
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4373608- 4378040
	Strand	-
Gene structure		5 exons

 

TOP 1-8 LAST

Locus member number		3
H-Inv ID		HIT000011800
Accession number		AK055186.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Hypothetical protein.
Similarity category		Category: Hypothetical protein(Category V).
		Hypothetical protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Splicing isoform
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4388292- 4393495
	Strand	-
Gene structure		2 exons

 

TOP 1-8 LAST

Locus member number		4
H-Inv ID		HIT000322542_05
Accession number		X62744.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		HLA class II histocompatibility antigen, DM alpha chain; MHC class II antigen DMA; Really interesting new gene 6 protein; Precursor;
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (P28067)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	HLA-DMA
	HGNC aliases	NA
	HGNC name	major histocompatibility complex, class II, DM alpha
Transcript feature		NA
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4373606- 4378065
	Strand	-
Gene structure		5 exons

 

TOP 1-8 LAST

Locus member number		5
H-Inv ID		HIT000424655_05
Accession number		AK291858.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		HLA class II histocompatibility antigen, DM alpha chain precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_006111)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	HLA-DMA
	HGNC aliases	NA
	HGNC name	major histocompatibility complex, class II, DM alpha
Transcript feature		NA
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4373607- 4378047
	Strand	-
Gene structure		5 exons

 

TOP 1-8 LAST

Locus member number		6
H-Inv ID		HIT000267233_07
Accession number		CR450324.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		MHC class II, alpha chain, N-terminal domain containing protein.
Similarity category		Category: IPR domain containing protein(Category III).
		InterPro domain (IPR001003) -containing protein.
Gene symbol/name	HGNC symbol	HLA-DMA
	HGNC aliases	NA
	HGNC name	major histocompatibility complex, class II, DM alpha
Transcript feature		NA
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4374262- 4378025
	Strand	-
Gene structure		4 exons

 

TOP 1-8 LAST

Locus member number		7
H-Inv ID		HIT000492705_03
Accession number		AK298081.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Immunoglobulin C1-set domain containing protein.
Similarity category		Category: IPR domain containing protein(Category III).
		InterPro domain (IPR003597) -containing protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		NA
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4374626- 4378084
	Strand	-
Gene structure		2 exons

 

TOP 1-8 LAST

Locus member number		8
H-Inv ID		HIT000429028_07
Accession number		AK310162.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to HLA class II histocompatibility antigen, DM alpha chain; MHC class II antigen DMA; Really interesting new gene 6 protein; Precursor;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (P28067)  [Identity/coverage = 100.0%/11.11%] to Homo sapiens (Human). protein.
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Transcript feature		Splicing isoform
Genomic location	Chromosome	6_mann_hap4
	Location	NA
	Position	4375379- 4378040
	Strand	-
Gene structure		3 exons