H-InvDB x AHG DB
Locus view
H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0056783 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Similar to Uncharacterized protein;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0056783
Genomic location  G-integra Help Chromosome 1
Location 1p36.21
Position 12884468- 12891264
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NM_001146344
Ensembl ENST00000331684ENST00000437584ENST00000535591
Entrez Gene Entrez Gene ID:440560
KEGG GENES KEGG GENES(440560)
GeneCard GeneCardPRAMEF11*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000502838HIT000250071
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-2 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000502838
Accession number BC144426.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2R975)  [Identity/coverage = 55.319%/65.85%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol PRAMEF11 
HGNC aliases NA
HGNC name PRAME family member 11 
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 1
Location 1p36.21
Position 12884618- 12891263
Strand -
Gene structure 4 exons
 
TOP 1-2 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000250071
Accession number AL049680.1
CAGE tag ID NA
EST ID NA
Coding potential Pseudogene candidate; 
Definition Pseudogene candidate (Uncharacterized protein;)
Similarity category  Help Category: Pseudogene candidate(Category VII).
Pseudogene candidate.
Gene symbol/name HGNC symbol PRAMEF11 
HGNC aliases NA
HGNC name PRAME family member 11 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1p36.21
Position 12884805- 12891264
Strand -
Gene structure 4 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0056783
Representative H-Inv ID Representative H-Inv IDHIT000502838
Accession number BC144426.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2R975)  [Identity/coverage = 55.319%/65.85%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol PRAMEF11 
HGNC aliases NA
HGNC name PRAME family member 11 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000259404
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_001146344
Ensembl ENST00000331684ENST00000437584ENST00000535591
Entrez Gene Entrez Gene ID:440560
KEGG GENES KEGG GENES(440560)
GeneCard GeneCardPRAMEF11*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:26-Mar-2013
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  115665116600155600600975605225605606606788606852606928607317607671608543608553608995609918610320612367612596
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(440560); 
Disease Entrez Gene ID:(440560); 
Gene function Entrez Gene ID:(440560); 
Substance Entrez Gene ID:(440560); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA