H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0030693 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0030693
Genomic location  G-integra Help Chromosome 3
Location 3p24.1
Position 27757887- 27764206
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NM_005442; 
Ensembl ENST00000295743;  ENST00000537516;  ENST00000537409;  ENST00000461503;  ENST00000535713;  ENST00000449599; 
Entrez Gene Entrez Gene ID:8320; 
KEGG GENES KEGG GENES(8320); 
GeneCard GeneCardEOMES;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000492013;  HIT000494123;  HIT000494319;  HIT000390614;  HIT000499779;  HIT000094891;  HIT000059016;  HIT000091065;  HIT000492085; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-9 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000492013
Accession number AK297389.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 95.595%/68.22%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758000- 27764204
Strand -
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000494123
Accession number AK299499.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 99.653%/84.11%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758122- 27764198
Strand -
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000494319
Accession number AK299695.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 99.799%/73.47%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758418- 27764203
Strand -
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000390614
Accession number BC131712.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 97.931%/84.84%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758441- 27763785
Strand -
Gene structure 7 exons
 
TOP 1-9 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000499779
Accession number AK316166.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 100.0%/57.43%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758000- 27764206
Strand -
Gene structure 6 exons
 
TOP 1-9 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000094891
Accession number BC037568.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O95936)  [Identity/coverage = 99.854%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27757887- 27763803
Strand -
Gene structure 6 exons
 
TOP 1-9 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000059016
Accession number AB031038.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (O95936)  [Identity/coverage = 98.688%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758562- 27763785
Strand -
Gene structure 6 exons
 
TOP 1-9 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000091065
Accession number BC025363.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 100.0%/56.85%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature NA
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27757887- 27761811
Strand -
Gene structure 5 exons
 
TOP 1-9 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000492085
Accession number AK297461.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin-like protein; Fragment;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q5QIW1)  [Identity/coverage = 100.0%/100.0%] to Mustela vison (American mink) (Neovison vison). protein.
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 3
Location 3p24.1
Position 27758512- 27764204
Strand -
Gene structure 4 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000059016;  Splicing isoformHIT000094891;  Splicing isoformHIT000390614;  Splicing isoformHIT000494123;  Splicing isoformHIT000492013;  Splicing isoformHIT000494319;  Splicing isoformHIT000492085;  Splicing isoformHIT000499779; 
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0030693
Representative H-Inv ID Representative H-Inv IDHIT000492013
Accession number AK297389.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Eomesodermin homolog; T-box brain protein 2; T-brain-2; TBR-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (O95936)  [Identity/coverage = 95.595%/68.22%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID HIF0001534
Gene family/group name Putative Transcription factor, T-box (IPR001699).
Evidence motif (InterPro) ID IPR001699
Gene symbol/name HGNC symbol EOMES 
HGNC aliases "eomesodermin (Xenopus laevis) homolog" 
HGNC name eomesodermin 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000359021
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_005442; 
Ensembl ENST00000295743;  ENST00000537516;  ENST00000537409;  ENST00000461503;  ENST00000535713;  ENST00000449599; 
Entrez Gene Entrez Gene ID:8320; 
KEGG GENES KEGG GENES(8320); 
GeneCard GeneCardEOMES;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Putative Transcription factor, T-box (IPR001699). Similarity Search ToolSimilarity search tool;  TACTTACT; 
Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:20-Apr-2012
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  601869;  607135;  607893;  608088;  609649;  609954;  611634; 
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(8320); 
Disease Entrez Gene ID:(8320); 
Gene function Entrez Gene ID:(8320); 
Substance Entrez Gene ID:(8320); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo Viewer;  LEGENDALEGENDA;