H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0028498 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0028498
Genomic location  G-integra Help Chromosome 1
Location 1p21.2
Position 101003693- 101007583
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:54112
KEGG GENES KEGG GENES(54112)
GeneCard GeneCardGPR88*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000059328HIT000094605HIT000384878HIT000386040HIT000387204HIT000066939
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-6 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000059328
Accession number AB042410.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9GZN0)  [Identity/coverage = 99.479%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 1
Location 1p21.2
Position 101003693- 101007571
Strand +
Gene structure 2 exons
 
TOP 1-6 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000094605
Accession number BC036775.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9GZN0)  [Identity/coverage = 100.0%/92.71%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1p21.2
Position 101003728- 101005592
Strand +
Gene structure 2 exons
 
TOP 1-6 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000384878
Accession number AK225748.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9GZN0)  [Identity/coverage = 99.74%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1p21.2
Position 101004457- 101005755
Strand +
Gene structure 1 exons
 
TOP 1-6 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000386040
Accession number AY336999.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9GZN0)  [Identity/coverage = 99.74%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1p21.2
Position 101004523- 101005677
Strand +
Gene structure 1 exons
 
TOP 1-6 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000387204
Accession number BC113861.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9GZN0)  [Identity/coverage = 97.315%/38.8%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1p21.2
Position 101003902- 101004965
Strand +
Gene structure 1 exons
 
TOP 1-6 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000066939
Accession number AF086060.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Transcript feature NA
Genomic location  G-integra Chromosome 1
Location 1p21.2
Position 101006932- 101007583
Strand +
Gene structure 1 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0028498
Representative H-Inv ID Representative H-Inv IDHIT000059328
Accession number AB042410.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Probable G-protein coupled receptor 88; Striatum-specific G-protein coupled receptor;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9GZN0)  [Identity/coverage = 99.479%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol GPR88 
HGNC aliases "G-protein coupled receptor 88", "G protein coupled receptor 88" 
HGNC name G protein-coupled receptor 88 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000107631
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:54112
KEGG GENES KEGG GENES(54112)
GeneCard GeneCardGPR88*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA260710;  AGhsB251102; 
Affymetrix
GeneChip
HG-Focus 220313_at; 
HG-U133 220313_at; 
HG-U133A 220313_at; 
HG-U133A_2 220313_at; 
HG-U133B NA
HG-U133_Plus_2 220313_at; 
HG-U95 51309_at; 
HG-U95A NA
HG-U95B 51309_at; 
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2348963;  2348964;  2348965;  2348966;  2348967;  2348968;  2348969;  2348970;  2348971;  2348972;  2348973;  2348974;  2348975;  2425342; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P149745; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P149749; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator