H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0019780 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; EC=4.1.1.45; Picolinate carboxylase;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0019780
Genomic location  G-integra Help Chromosome 2
Location 2q21.3
Position 135596117- 135659604
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:130013
KEGG GENES KEGG GENES(130013)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000338742HIT000037448HIT000044881HIT000061193
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-4 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000338742
Accession number BC107420.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; EC=4.1.1.45; Picolinate carboxylase;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q8TDX5)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135596249- 135659600
Strand +
Gene structure 10 exons
 
TOP 1-4 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000037448
Accession number BC016018.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_612199)  [Identity/coverage = 99.687%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135596188- 135659601
Strand +
Gene structure 10 exons
 
TOP 1-4 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000044881
Accession number AK125008.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_612199)  [Identity/coverage = 100.0%/84.23%] to Homo sapiens protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135596186- 135631231
Strand +
Gene structure 8 exons
 
TOP 1-4 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000061193
Accession number AB071418.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; EC=4.1.1.45; Picolinate carboxylase;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q8TDX5)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 2
Location 2q21.3
Position 135596253- 135659430
Strand +
Gene structure 10 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000338742Splicing isoformHIT000037448Splicing isoformHIT000044881
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0019780
Representative H-Inv ID Representative H-Inv IDHIT000338742
Accession number BC107420.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; EC=4.1.1.45; Picolinate carboxylase;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q8TDX5)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000067523
No. of interaction 5
Interaction partner(s) HIP000022367HIP000023532HIP000023979HIP000031586HIP000034631
BIND NA
DIP NA
MINT MINT-67614; 
HPRD 02281; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:130013
KEGG GENES KEGG GENES(130013)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene NA
Affymetrix
GeneChip
HG-Focus NA
HG-U133 230602_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 230602_at; 
HG-U133_Plus_2 230602_at; 
HG-U95 61917_at; 
HG-U95A NA
HG-U95B NA
HG-U95C 61917_at; 
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2507175;  2507180;  2507181;  2507183;  2507185;  2507189;  2507190;  2507193;  2507194;  2507195;  2507202;  2507203;  2507204;  2577615;  2577619; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P376727; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P376727; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator