H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0018021 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Potassium channel subfamily K member 17 isoform 2.
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0018021
Genomic location  G-integra Help Chromosome 6
Location 6p21.2
Position 39266777- 39282237
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NM_031460; 
Ensembl ENST00000453413;  ENST00000503878;  ENST00000373231; 
Entrez Gene Entrez Gene ID:89822; 
KEGG GENES KEGG GENES(89822); 
GeneCard GeneCardKCNK17;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000293079;  HIT000039992;  HIT000252897;  HIT000305824;  HIT000302166;  HIT000078326;  HIT000558387;  HIT000434139;  HIT000429448;  HIT000077989; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-10 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000293079
Accession number CR613884.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17 isoform 2.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001128583)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266788- 39282237
Strand -
Gene structure 6 exons
 
TOP 1-10 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000039992
Accession number BC025726.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96T54)  [Identity/coverage = 99.694%/98.49%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266777- 39282183
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000252897
Accession number AY358853.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17 isoform 1.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_113648)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266780- 39282187
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000305824
Accession number CR626629.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17 isoform 1.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_113648)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266810- 39282197
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000302166
Accession number CR622971.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17 isoform 1.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_113648)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266793- 39282178
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000078326
Accession number AF358910.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17 isoform 1.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_113648)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39267203- 39282096
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000558387
Accession number EU978944.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96T54)  [Identity/coverage = 99.694%/98.49%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266991- 39282143
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000434139
Accession number AK315273.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96T54)  [Identity/coverage = 99.699%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39267203- 39282227
Strand -
Gene structure 5 exons
 
TOP 1-10 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000429448
Accession number AK310582.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96T54)  [Identity/coverage = 99.099%/66.87%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39271755- 39282201
Strand -
Gene structure 4 exons
 
TOP 1-10 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000077989
Accession number AF339912.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96T54)  [Identity/coverage = 99.614%/78.01%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Transcript feature NA
Genomic location  G-integra Chromosome 6
Location 6p21.2
Position 39266777- 39282198
Strand -
Gene structure 5 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms Internal AS; 
Position of alternative splicing isoforms Cassette; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000293079;  Splicing isoformHIT000305824; 
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0018021
Representative H-Inv ID Representative H-Inv IDHIT000293079
Accession number CR613884.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Potassium channel subfamily K member 17 isoform 2.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001128583)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID HIF0000156
Gene family/group name Putative Ion transport 2 (IPR013099).
Evidence motif (InterPro) ID IPR013099
Gene symbol/name HGNC symbol KCNK17 
HGNC aliases NA
HGNC name potassium channel, subfamily K, member 17 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000116893
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_031460; 
Ensembl ENST00000453413;  ENST00000503878;  ENST00000373231; 
Entrez Gene Entrez Gene ID:89822; 
KEGG GENES KEGG GENES(89822); 
GeneCard GeneCardKCNK17;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Putative Ion transport 2 (IPR013099). Similarity Search ToolSimilarity search tool;  TACTTACT; 
Gene expression information   H-ANGEL DNAProbeLocator Last modified:20-Apr-2012
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator		 AceGene AGhsB050619; 
Affymetrix
GeneChip		 HG-Focus NA
HG-U133 224049_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 224049_at; 
HG-U133_Plus_2 224049_at; 
HG-U95 91681_at; 
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D 91681_at; 
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2952901;  2952902;  2952903;  2952904;  2952905;  2952906;  2952912;  2952913;  2952914;  2952919;  2952920;  2952925;  2952926; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P42127; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P42128;  A_24_P112032; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator; 

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:20-Apr-2012
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  122550;  143400;  150270;  271250;  601086;  604519;  607017;  608244;  608645;  608816;  610212;  611185;  612671; 
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(89822); 
Disease Entrez Gene ID:(89822); 
Gene function Entrez Gene ID:(89822); 
Substance Entrez Gene ID:(89822); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo Viewer;  LEGENDALEGENDA;