H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0015175 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Similar to Protein capicua homolog;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0015175
Genomic location  G-integra Help Chromosome 19
Location 19q13.2
Position 42775073- 42800299
Strand +
Antisense cluster ID(s) HIX0137483 overlap at CDSs (all)
Database links RefSeq NM_015125; 
Ensembl ENST00000160740; 
Entrez Gene Entrez Gene ID:23152; 
KEGG GENES NA
GeneCard GeneCardCIC;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000436183;  HIT000000012;  HIT000009213;  HIT000078412;  HIT000440717;  pHIT000120018;  pHIT000120019;  pHIT000033716;  pHIT000093438; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-9 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000436183
Accession number DQ388764.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 98.75%/99.5%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript; 
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42788817- 42799323
Strand +
Gene structure 20 exons
 
TOP 1-9 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000000012
Accession number AB002304.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 99.862%/90.24%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol CIC 
HGNC aliases "capicua (Drosophila) homolog" 
HGNC name capicua homolog (Drosophila) 
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42791489- 42799949
Strand +
Gene structure 17 exons
 
TOP 1-9 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000009213
Accession number AK025939.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 100.0%/19.22%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol CIC 
HGNC aliases "capicua (Drosophila) homolog" 
HGNC name capicua homolog (Drosophila) 
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42797844- 42799948
Strand +
Gene structure 5 exons
 
TOP 1-9 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000078412
Accession number AF363689.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protein capicua homolog;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q96RK0)  [Identity/coverage = 99.938%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol CIC 
HGNC aliases "capicua (Drosophila) homolog" 
HGNC name capicua homolog (Drosophila) 
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42788817- 42799949
Strand +
Gene structure 20 exons
 
TOP 1-9 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000440717
Accession number DQ574186.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, uncharacterized transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42799023- 42799053
Strand +
Gene structure 1 exons
 
TOP 1-9 LAST 
Locus member number 6
H-Inv ID Transcript viewpHIT000120018
Accession number NA
CAGE tag ID T19F02D44007; 
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 99.934%/94.34%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42775073- 42799924
Strand +
Gene structure 24 exons
 
TOP 1-9 LAST 
Locus member number 7
H-Inv ID Transcript viewpHIT000120019
Accession number NA
CAGE tag ID T19F02D442E6; 
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 99.934%/94.34%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42775073- 42799924
Strand +
Gene structure 24 exons
 
TOP 1-9 LAST 
Locus member number 8
H-Inv ID Transcript viewpHIT000033716
Accession number NA
CAGE tag ID H05BA02M1503;  H05BD81I2004;  H21BA09K0611;  H21BB95N0904;  H22BA09E1806; 
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 99.247%/93.84%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42787566- 42800299
Strand +
Gene structure 22 exons
 
TOP 1-9 LAST 
Locus member number 9
H-Inv ID Transcript viewpHIT000093438
Accession number NA
CAGE tag ID H09BA62M1805;  H15BA09O1701;  H21BB58L0302;  H22BA24L1910;  H22BA93H0403; 
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 99.933%/92.85%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 19
Location 19q13.2
Position 42787566- 42799924
Strand +
Gene structure 22 exons

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0015175
Representative H-Inv ID Representative H-Inv IDHIT000436183
Accession number DQ388764.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Protein capicua homolog;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q96RK0)  [Identity/coverage = 98.75%/99.5%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol CIC 
HGNC aliases "capicua (Drosophila) homolog" 
HGNC name capicua homolog (Drosophila) 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000199907
No. of interaction 13
Interaction partner(s) HIP000026162;  HIP000026162;  HIP000027404;  HIP000031498;  HIP000031498;  HIP000031985;  HIP000041487;  HIP000047466;  HIP000099690;  HIP000100735;  HIP000102400;  HIP000104180;  HIP000165863; 
BIND 12516;  12517; 
DIP NA
MINT MINT-58196; 
HPRD 03898;  03923;  06472;  09082;  10539;  17637; 
IntAct EBI-311587;  EBI-2835933;  EBI-311591;  EBI-4286917; 
Database links RefSeq NM_015125; 
Ensembl ENST00000160740; 
Entrez Gene Entrez Gene ID:23152; 
KEGG GENES NA
GeneCard GeneCardCIC;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Gene familyGene family;  Similarity Search ToolSimilarity search tool;  TACTTACT; 
Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:20-Apr-2012
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  102699;  120050;  129150;  227050;  600740;  600757;  601764;  603855;  604317;  604805;  606712;  606763;  607592;  608542;  609376;  611097;  611907; 
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(23152); 
Disease Entrez Gene ID:(23152); 
Gene function Entrez Gene ID:(23152); 
Substance Entrez Gene ID:(23152); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo Viewer;  LEGENDALEGENDA;