H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0014446 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Unconventional myosin-Vb;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0014446
Genomic location  G-integra Help Chromosome 18
Location 18q21.1
Position 47349156- 47721463
Strand -
Antisense cluster ID(s) HIX0027381 overlap at CDSs (all)
HIX0039793 overlap at CDSs (all)
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:4645
KEGG GENES KEGG GENES(4645)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000409105HIT000000836HIT000008610HIT000025110HIT000018016HIT000085685HIT000496600HIT000093119HIT000192786
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-9 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000409105
Accession number AB290160.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Unconventional myosin-Vb;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9ULV0)  [Identity/coverage = 99.892%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47349186- 47721268
Strand -
Gene structure 40 exons
 
TOP 1-9 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000000836
Accession number AB032945.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Unconventional myosin-Vb;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9ULV0)  [Identity/coverage = 99.892%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47349186- 47721178
Strand -
Gene structure 40 exons
 
TOP 1-9 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000008610
Accession number AK025336.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Unconventional myosin-Vb;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9ULV0)  [Identity/coverage = 100.0%/53.63%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47352630- 47429205
Strand -
Gene structure 19 exons
 
TOP 1-9 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000025110
Accession number AL133643.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Unconventional myosin-Vb;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9ULV0)  [Identity/coverage = 99.882%/47.08%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47352630- 47421421
Strand -
Gene structure 18 exons
 
TOP 1-9 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000018016
Accession number AK093149.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Unconventional myosin-Vb;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9ULV0)  [Identity/coverage = 100.0%/4.55%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47352629- 47623988
Strand -
Gene structure 17 exons
 
TOP 1-9 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000085685
Accession number AY274809.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Unconventional myosin-Vb;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9ULV0)  [Identity/coverage = 100.0%/4.55%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47352629- 47623988
Strand -
Gene structure 17 exons
 
TOP 1-9 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000496600
Accession number AK301976.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Unconventional myosin-Vb;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9ULV0)  [Identity/coverage = 99.799%/26.89%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47352630- 47624009
Strand -
Gene structure 12 exons
 
TOP 1-9 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000093119
Accession number BC033527.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Unconventional myosin-Vb;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9ULV0)  [Identity/coverage = 100.0%/23.86%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47352630- 47376177
Strand -
Gene structure 9 exons
 
TOP 1-9 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000192786
Accession number L29143.1
CAGE tag ID NA
EST ID NA
Coding potential Non-protein-coding; 
Definition Non-protein-coding transcript, unclassifiable transcript.
Similarity category  Help Category: Non-protein coding transcript.
NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q21.1
Position 47527628- 47527726
Strand -
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site;  Mutually exclusive; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000008610Splicing isoformHIT000496600Splicing isoformHIT000409105Splicing isoformHIT000093119Splicing isoformHIT000018016
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0014446
Representative H-Inv ID Representative H-Inv IDHIT000409105
Accession number AB290160.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Unconventional myosin-Vb;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9ULV0)  [Identity/coverage = 99.892%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol NA
HGNC aliases NA
HGNC name NA
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000104373
No. of interaction 1
Interaction partner(s) HIP000104785
BIND NA
DIP 111636E; 
MINT MINT-51243;  MINT-5225020; 
HPRD 00907;  02605;  05009;  05715;  06698;  10548;  13873; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:4645
KEGG GENES KEGG GENES(4645)
GeneCard NA *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name: Microvillus inclusion disease (251850); 
Related information in OMIM OMIM ID:  606540;  Title: MYOSIN VB
Co-localized orphan diseases NA
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(4645); 
Disease Entrez Gene ID:(4645); 
Gene function Entrez Gene ID:(4645); 
Substance Entrez Gene ID:(4645); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA