H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0014377 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Aquaporin-4 isoform a.
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0014377
Genomic location  G-integra Help Chromosome 18
Location 18q11.2
Position 24432009- 24445782
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NM_004028; 
Ensembl ENST00000440832;  ENST00000383168;  ENST00000383170; 
Entrez Gene Entrez Gene ID:361; 
KEGG GENES KEGG GENES(361); 
GeneCard GeneCardAQP4;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000101680;  HIT000039449;  HIT000010002;  HIT000220777;  HIT000653747;  HIT000220778;  HIT000489693;  HIT000242436;  HIT000330464;  HIT000219396;  HIT000329091;  HIT000098203;  HIT000092203; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-10 11-13 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000101680
Accession number D63412.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform a.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001641)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24435423- 24445673
Strand -
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000039449
Accession number BC022286.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform a.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001641)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24436013- 24445673
Strand -
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000010002
Accession number AK026728.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24432288- 24434572
Strand -
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000220777
Accession number U63622.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform a.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001641)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24436034- 24445692
Strand -
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000653747
Accession number HQ901095.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform a.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001641)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24436175- 24445782
Strand -
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000220778
Accession number U63623.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform b.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_004019)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24435984- 24442535
Strand -
Gene structure 4 exons
 
TOP 1-10 11-13 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000489693
Accession number AK295069.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4; AQP-4; Mercurial-insensitive water channel; MIWC; WCH4;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P55087)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24436122- 24445679
Strand -
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000242436
Accession number AB128929.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Aquaporin-4; AQP-4; Mercurial-insensitive water channel; MIWC; WCH4;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (P55087)  [Identity/coverage = 100.0%/60.99%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24436175- 24445653
Strand -
Gene structure 6 exons
 
TOP 1-10 11-13 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000330464
Accession number AK222684.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin 4 isoform a variant; Fragment;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q53H97)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24435733- 24445720
Strand -
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000219396
Accession number U34845.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform b.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_004019)  [Identity/coverage = 98.671%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24435480- 24442812
Strand -
Gene structure 5 exons
 
TOP 1-10 11-13 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000329091
Accession number AB209156.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4; AQP-4; Mercurial-insensitive water channel; MIWC; WCH4;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (P55087)  [Identity/coverage = 99.528%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24432010- 24445674
Strand -
Gene structure 3 exons
 
TOP 1-10 11-13 LAST 
Locus member number 12
H-Inv ID Transcript viewHIT000098203
Accession number BC045780.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24432009- 24433679
Strand -
Gene structure 1 exons
 
TOP 1-10 11-13 LAST 
Locus member number 13
H-Inv ID Transcript viewHIT000092203
Accession number BC030745.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical short protein.
Similarity category  Help Category: Hypothetical short protein(Category VI).
Hypothetical short protein.
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 18
Location 18q11.2
Position 24432009- 24433293
Strand -
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site;  Internal donor site;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000101680;  Splicing isoformHIT000329091;  Splicing isoformHIT000219396; 
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0014377
Representative H-Inv ID Representative H-Inv IDHIT000101680
Accession number D63412.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Aquaporin-4 isoform a.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_001641)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID HIF0000155
Gene family/group name Putative Major intrinsic protein (IPR000425).
Evidence motif (InterPro) ID IPR000425
Gene symbol/name HGNC symbol AQP4 
HGNC aliases NA
HGNC name aquaporin 4 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000096738
No. of interaction 1
Interaction partner(s) HIP000092670; 
BIND 262677; 
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_004028; 
Ensembl ENST00000440832;  ENST00000383168;  ENST00000383170; 
Entrez Gene Entrez Gene ID:361; 
KEGG GENES KEGG GENES(361); 
GeneCard GeneCardAQP4;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Putative Major intrinsic protein (IPR000425). Similarity Search ToolSimilarity search tool;  TACTTACT; 
Gene expression information   H-ANGEL DNAProbeLocator Last modified:20-Apr-2012
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator		 AceGene AGhsA010410; 
Affymetrix
GeneChip		 HG-Focus 210067_at; 
HG-U133 210066_s_at;  210067_at;  210068_s_at;  210906_x_at; 
HG-U133A 210066_s_at;  210067_at;  210068_s_at;  210906_x_at; 
HG-U133A_2 210066_s_at;  210067_at;  210068_s_at;  210906_x_at; 
HG-U133B NA
HG-U133_Plus_2 210066_s_at;  210067_at;  210068_s_at;  210906_x_at; 
HG-U95 40793_s_at; 
HG-U95A 40793_s_at; 
HG-U95B NA
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3782848;  3802402;  3802403;  3802404;  3802406;  3802407;  3802409;  3802410;  3802414; 
HuGeneFL D63412_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P107565;  A_23_P252041; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P107565; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator; 

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:20-Apr-2012
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  107200;  143850;  251255;  606744; 
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(361); 
Disease Entrez Gene ID:(361); 
Gene function Entrez Gene ID:(361); 
Substance Entrez Gene ID:(361); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo Viewer;  LEGENDALEGENDA;