H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0013973 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0013973
Genomic location  G-integra Help Chromosome 17
Location 17q21.33
Position 48423393- 48442593
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:64132
KEGG GENES KEGG GENES(64132)
GeneCard GeneCardXYLT2*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000246380HIT000028122HIT000011778HIT000099485HIT000094243HIT000494623HIT000252135HIT000089183
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-8 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000246380
Accession number AJ277442.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9H1B5)  [Identity/coverage = 99.884%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48423393- 48438512
Strand +
Gene structure 11 exons
 
TOP 1-8 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000028122
Accession number AL833210.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9H1B5)  [Identity/coverage = 99.065%/12.37%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48436339- 48438512
Strand +
Gene structure 1 exons
 
TOP 1-8 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000011778
Accession number AK055164.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Hypothetical protein.
Similarity category  Help Category: Hypothetical protein(Category V).
Hypothetical protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48440328- 48442593
Strand +
Gene structure 1 exons
 
TOP 1-8 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000099485
Accession number BC052262.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9H1B5)  [Identity/coverage = 99.884%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48423473- 48438512
Strand +
Gene structure 11 exons
 
TOP 1-8 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000094243
Accession number BC036069.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9H1B5)  [Identity/coverage = 99.769%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48423496- 48438512
Strand +
Gene structure 11 exons
 
TOP 1-8 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000494623
Accession number AK299999.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9H1B5)  [Identity/coverage = 100.0%/74.8%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48423496- 48440499
Strand +
Gene structure 10 exons
 
TOP 1-8 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000252135
Accession number AY358090.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q9H1B5)  [Identity/coverage = 99.875%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48423497- 48438512
Strand +
Gene structure 10 exons
 
TOP 1-8 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000089183
Accession number BC017084.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Transcript feature NA
Genomic location  G-integra Chromosome 17
Location 17q21.33
Position 48434527- 48435427
Strand +
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Mutually exclusive; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000252135Splicing isoformHIT000494623Splicing isoformHIT000246380
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0013973
Representative H-Inv ID Representative H-Inv IDHIT000246380
Accession number AJ277442.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Xylosyltransferase 2; EC=2.4.2.26; Peptide O-xylosyltransferase 1; Xylosyltransferase II; XT-II; XylT-II;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q9H1B5)  [Identity/coverage = 99.884%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol XYLT2 
HGNC aliases NA
HGNC name xylosyltransferase II 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000110078
No. of interaction 1
Interaction partner(s) HIP000086909
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:64132
KEGG GENES KEGG GENES(64132)
GeneCard GeneCardXYLT2*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsB230519; 
Affymetrix
GeneChip
HG-Focus 219401_at; 
HG-U133 219401_at;  231550_at; 
HG-U133A 219401_at; 
HG-U133A_2 219401_at; 
HG-U133B 231550_at; 
HG-U133_Plus_2 219401_at;  231550_at; 
HG-U95 44675_at; 
HG-U95A NA
HG-U95B 44675_at; 
HG-U95C NA
HG-U95D NA
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3726333;  3726334;  3726335;  3726336;  3726346;  3726347;  3726348;  3726349;  3726351;  3726353;  3726354;  3726355;  3726357;  3726358;  3726360;  3726361;  3726362;  3762295; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P15582; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P15582; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:27-May-2015
Disease relation Disease name: {Pseudoxanthoma elasticum, modifier of severity of} (264800); 
Related information in OMIM OMIM ID:  608125;  Title: XYLOSYLTRANSFERASE 2
Co-localized orphan diseases NA
Disease related mutation MutationView:  608125
JRE-1.4.0 or later is required.Download JRE at Sun's web site.
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(64132); 
Disease Entrez Gene ID:(64132); 
Gene function Entrez Gene ID:(64132); 
Substance Entrez Gene ID:(64132); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo ViewerLEGENDALEGENDA